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PW_scaffold_636_4

Organism: PW_Clostridia_42_10_partial

partial RP 34 / 55 MC: 1 BSCG 34 / 51 MC: 2 ASCG 8 / 38
Location: 933..1466

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein RimM KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 171.0
  • Bit_score: 172
  • Evalue 9.30e-41
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium ther UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 171.0
  • Bit_score: 172
  • Evalue 4.60e-40
Ribosome maturation factor RimM similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 172
  • Evalue 1.40e-40

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 534
GTGAATCCCAAAAAAGTGATCCCGGAAAAAATAGCAGTTGCAAAAGTAATAAACACCCATGGCATTAAAGGGGAAGTTAAGGCAGTACCCCTTTCTGACTTTAAAGATAGATATCAGCAGCTGAAGGAGGTTTTTATTAAGGAAAAAAACGAATACAGCCCTTTGAATTTGGAGAAAGTCCGGTGGCATAAGGGAAACTTGCTTTTGAAATTTAAAGAAATAAGCAGTATTAATGAAGCTGAACTTTTAAAAGGAAATTATATATTTATTAACCGCAGTGATGCTGTGGAGCTTCCTAAAGATACTTATTACATTTTTGAAATAGTGGGATTGGAAGTATATGATGCAGAAAATAATGTTAAACTTGGAATAGTAACTGAAGTTCTTCAAACAGGAGCTAATGATGTGTACATTATAAAAGATTCTTCTGGCAGAGAACTTCTTGTACCGGCATTAAAAAAAGTGGTTGTGAAAGTTGATTTGGAAAAGAATAGAATGCTGGTTAAGCTGCCGGAAGGTTTGCTGGATCAATGA
PROTEIN sequence
Length: 178
VNPKKVIPEKIAVAKVINTHGIKGEVKAVPLSDFKDRYQQLKEVFIKEKNEYSPLNLEKVRWHKGNLLLKFKEISSINEAELLKGNYIFINRSDAVELPKDTYYIFEIVGLEVYDAENNVKLGIVTEVLQTGANDVYIIKDSSGRELLVPALKKVVVKVDLEKNRMLVKLPEGLLDQ*