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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340

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Displaying items 31-44 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_31
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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29934..31415
-----------------
DNA (1482bp)
protein (494aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Idiomarina sp. A28L RepID=F7S193_9GAMM
OmpA/MotB; K03286 OmpA-OmpF porin, OOP family Tax=RBG_16_Gamma2_65_34_curated
OmpA/MotB
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_32
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31709..31987)
-----------------
DNA (279bp)
protein (93aa)
Fatty acid desaturase n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CUV0_9ALTE
fatty acid desaturase
Fatty acid desaturase Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_33
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32432..33274
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037F00E0
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_34
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33319..33417
-----------------
DNA (99bp)
protein (33aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_35
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33458..33847
-----------------
DNA (390bp)
protein (130aa)
Transport-associated protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ED4_DECAR
transport-associated protein Tax=RBG_16_Gamma2_65_34_curated
transporter
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_36
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33883..34170
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QT82_9ZZZZ
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_37
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34528..35382)
-----------------
DNA (855bp)
protein (285aa)
Transcriptional regulator, Crp/Fnr family n=2 Tax=Methylovorus RepID=C6XBC9_METSD
Crp/Fnr family transcriptional regulator Tax=RBG_16_Gamma2_65_34_curated
Crp/Fnr family transcriptional regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_38
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35723..36817)
-----------------
DNA (1095bp)
protein (365aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GF77_NITSI
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_39
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36974..37348
-----------------
DNA (375bp)
protein (125aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XU34_9BACT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_40
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37373..39193)
-----------------
DNA (1821bp)
protein (607aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK6_9PROT
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RBG_16_Gamma2_65_34_curated
ABC transporter
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_41
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40163..41437
-----------------
DNA (1275bp)
protein (425aa)
nitrate transporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter Tax=RBG_16_Gamma2_65_34_curated
Putative nitrate transporter id=4439995 bin=GWC2_Nitrospirae-rel_56_14 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
nitrate transporter
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_42
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41651..43339
-----------------
DNA (1689bp)
protein (563aa)
protein phosphatase n=1 Tax=Methylocystis rosea RepID=UPI0003653895
protein serine/threonine phosphatase Tax=RBG_16_Gamma2_65_34_curated
protein serine/threonine phosphatase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_43
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43518..45953
-----------------
DNA (2436bp)
protein (812aa)
nitrite reductase (NAD(P)H), large subunit; K00362 nitrite reductase (NAD(P)H) large subunit [EC:1.7.1.4] Tax=RBG_16_Gamma2_65_34_curated
nitrite reductase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003701EB3
nitrite reductase (NAD(P)H), large subunit
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_44
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46059..48752
-----------------
DNA (2694bp)
protein (898aa)
nasA; nitrate reductase (EC:1.7.99.4); K00372 nitrate reductase catalytic subunit [EC:1.7.99.4] Tax=RBG_16_Gamma2_65_34_curated
nasA; nitrate reductase (EC:1.7.99.4)
Nitrate reductase catalytic subunit n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BWM8_9GAMM
Displaying items 31-44 of 44 in total

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