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RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_26

Organism: candidate division WOR-1 bacterium RIFCSPHIGHO2_01_FULL_53_15

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 10 / 38 MC: 2
Location: comp(21936..23276)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN/SigL; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 446.0
  • Bit_score: 874
  • Evalue 8.20e-251
RNA polymerase, sigma 54 subunit, RpoN id=1870876 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 457.0
  • Bit_score: 339
  • Evalue 5.20e-90
RNA polymerase, sigma 54 subunit, RpoN/SigL similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 477.0
  • Bit_score: 260
  • Evalue 8.60e-67

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Taxonomy

R_WOR_1_53_15 → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 1341
ATGGCCGAACTAAAACTACAAGCCAACTTGAGCCAGACACTCGATCTTCTCCTGGCCCCCCGCCTTCTCCAGATGCTCAAGGTCTTGAGCCTCCCCTACCTCGAATTTGTCGATCAGGTCAAAAAGGAAGCCGAAGAAAATCCCGTGATGGAGGTCGAAAACACCGACGAATATGTGGAATTCCTGCGTTATCTCTCCGAAGGCCGCAACGTCAAAAAAGAAGCGGACTTTACTGAATTGCCCGGCCTTGAGAATTTCAGTCGGGTCGCCAAAACGCTTGAGGAACACCTGCTTGAACAGCTGGAGTTCGAGGATATCGAGGACAATTTAAAAGGGATCGGCCGCGAGATCATCGGCAATATCGACGACCAGGGCTATCTCCTGGCCTACCCTACCCTGCGCGACCGGCTGATGTCGCAGTTCGATGTCTCCCGGCCGACGGTCGACAAGGTCTTAAAGATCATCCAGACATTTGAGCCGGAAGGTGTCGGCGCGCGGGACCTCAAGGAGTGCCTCCTTCTCCAGATCAAGATGTATGATTTTGAAAACGAGGAGCTGGAAGAAATCCTCACAAAAGTCGTCGAAAAACATCTTGAAGACCTGGAGGCGAAAAATTTCGCCAAGATCGCGCAAGCGCTCGGCATCCCGGAGAGCGGCGTCGAAGAGATCGCCAATTACATCAAAAACAATCTCAACCCCCTGCCCGGCGCCTCGTACGGCGGCGAGGCCAAGCAGGTCGTCCCCTCCTTTGCCGTCGAAGAAACAGGCAAGGGCTACAAGTTCGTCAATCTGGAGACCCAGTACGGCCCGCGCATCAAATTCTCACAAACCTATCTCAAGATGCTTGATGACCCGAAGACGGATGAGAAGACAAAGTCCTTCCTCAAAGACAAGCTCAAGCGGGCGAAAGAGCTGGCGGAAGATTTTGCCAAAAGAAGTGAAACTTTGGATAAGATAGTGCGAAAGATAATCGGGTCGCAGGACGACTTCCTGAAAAAAGGGGTGCTCTGGCTCAAGCCCCTGACGCAGAAGAGCTTGTCCGACGAATTCGGCCTGCATCCCTCGACCATTTCGCGTTCGGTGGCCGGCAAATATATCCAGACGCCGCAGGGGCTCTATCCGTTGAAGTTCCTCTGCCCCCGCGGGCCGAAAGGACTGACCGCCGCCCGGCTGAAAGCGATGCTGGTCGAGATCGTGAACGGGGAAAACAAAAGCGAGCCGCTGACCGACGAGCAGGTCAGGCGGGCGATGAAAGAGCGCGGCGTCGAACTTGACCGCCGGACCGTCGCCTATTACCGGAAGGAGCTGGGACTGCCGACGGCAATGGATAGAAGGAGTTGA
PROTEIN sequence
Length: 447
MAELKLQANLSQTLDLLLAPRLLQMLKVLSLPYLEFVDQVKKEAEENPVMEVENTDEYVEFLRYLSEGRNVKKEADFTELPGLENFSRVAKTLEEHLLEQLEFEDIEDNLKGIGREIIGNIDDQGYLLAYPTLRDRLMSQFDVSRPTVDKVLKIIQTFEPEGVGARDLKECLLLQIKMYDFENEELEEILTKVVEKHLEDLEAKNFAKIAQALGIPESGVEEIANYIKNNLNPLPGASYGGEAKQVVPSFAVEETGKGYKFVNLETQYGPRIKFSQTYLKMLDDPKTDEKTKSFLKDKLKRAKELAEDFAKRSETLDKIVRKIIGSQDDFLKKGVLWLKPLTQKSLSDEFGLHPSTISRSVAGKYIQTPQGLYPLKFLCPRGPKGLTAARLKAMLVEIVNGENKSEPLTDEQVRRAMKERGVELDRRTVAYYRKELGLPTAMDRRS*