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gwf2_scaffold_33

Alias: PER_GWF2_39_17_1

Search features with annotation key words

Displaying items 61-90 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_33_61
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

71666..75610
-----------------
DNA (3945bp)
protein (1315aa)
Uncharacterized protein n=1 Tax=Bacillus cereus R309803 RepID=C2Q800_BACCE
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_33_62
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

75758..77086
-----------------
DNA (1329bp)
protein (443aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=PER_GWF2_39_17
Nucleotide sugar dehydrogenase n=3 Tax=Bacteroides RepID=I9JJ98_9BACE rbh
nucleotide sugar dehydrogenase
seg (db=Seg db_id=seg from=402 to=420)
gwf2_scaffold_33_63
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

77114..78058
-----------------
DNA (945bp)
protein (315aa)
hypothetical protein; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=PER_GWF2_39_17
NAD-dependent epimerase/dehydratase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUR4_9BACT rbh
hypothetical protein
coiled-coil (db=Coil db_id=coil from=41 to=62 evalue=NA)
gwf2_scaffold_33_64
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

78132..79670
-----------------
DNA (1539bp)
protein (513aa)
Mg chelatase, subunit ChlI n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFW7_THET1 rbh
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=PER_GWF2_39_17
Mg chelatase subunit ChlI
seg (db=Seg db_id=seg from=282 to=292)
gwf2_scaffold_33_65
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

79746..82973
-----------------
DNA (3228bp)
protein (1076aa)
Carbamoyl-phosphate synthase large subunit, carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:KKR09227.1}; EC=6.3.5.5 {ECO:0000313|EMBL:KKR09227.1};; TaxID=1619067 species="Bacteria; Peregr
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase, large subunit n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S2J6_9PORP rbh
CPSaseII_lrg: carbamoyl-phosphate syntha (db=HMMTigr db_id=TIGR01369 from=4 to=1058 evalue=0.0 interpro_id=IPR006275 interpro_description=Carbamoyl-phosphate synthase, large subunit GO=Biological Process: nitrogen compound metabolic process (GO:0006807))
gwf2_scaffold_33_66
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(82970..83911)
-----------------
DNA (942bp)
protein (314aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_67
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

84087..84992
-----------------
DNA (906bp)
protein (302aa)
Pyridoxine biosynthesis protein pyroA n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) RepID=I1CDH3_RHIO9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR26268.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
pyridoxal biosynthesis lyase PdxS
PDXS_SNZ_1 (db=PatternScan db_id=PS01235 from=214 to=232 evalue=0.0 interpro_id=IPR001852 interpro_description=Vitamin B6 biosynthesis protein GO=Biological Process: pyridoxal phosphate biosynthetic process (GO:0042823))
gwf2_scaffold_33_68
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

84986..85690
-----------------
DNA (705bp)
protein (235aa)
pyridoxal phosphate synthase yaaE subunit; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=PER_GWF2_39_17
Glutamine amidotransferase subunit PdxT n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEG5_9CLOT
pyridoxal phosphate synthase yaaE subunit
PDXT_SNO_1 (db=PatternScan db_id=PS01236 from=79 to=89 evalue=0.0 interpro_id=IPR021196 interpro_description=PdxT/SNO family, conserved site)
gwf2_scaffold_33_69
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

85720..86301
-----------------
DNA (582bp)
protein (194aa)
GTP cyclohydrolase I, GTP cyclohydrolase I {ECO:0000313|EMBL:KKR26270.1}; EC=3.5.4.16 {ECO:0000313|EMBL:KKR26270.1};; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria ba
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=4 Tax=Paenibacillus RepID=D3EE35_GEOS4
GTP_CYCLOHYDROL_1_1 (db=PatternScan db_id=PS00859 from=70 to=86 evalue=0.0 interpro_id=IPR018234 interpro_description=GTP cyclohydrolase I, conserved site GO=Molecular Function: GTP cyclohydrolase I activity (GO:0003934), Cellular Component: cytoplasm (GO:0005737), Biological Process: tetrahydrofolate biosynthetic process (GO:0046654))
gwf2_scaffold_33_70
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

86331..86948
-----------------
DNA (618bp)
protein (206aa)
Recombination protein RecR n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3J0_CALAS
recR; recombination protein RecR; K06187 recombination protein RecR Tax=PER_GWF2_39_17
recR; recombination protein RecR
(db=HMMPfam db_id=PF01751 from=84 to=177 evalue=1.9e-11 interpro_id=IPR006171 interpro_description=Toprim domain)
gwf2_scaffold_33_71
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

87042..88244
-----------------
DNA (1203bp)
protein (401aa)
serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=PER_GWF2_39_17
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZY9_DESAS
serine/threonine protein kinase with PASTA sensor(s)
PROTEIN_KINASE_ST (db=PatternScan db_id=PS00108 from=225 to=237 evalue=0.0 interpro_id=IPR008271 interpro_description=Serine/threonine-protein kinase, active site GO=Molecular Function: protein serine/threonine kinase activity (GO:0004674), Biological Process: protein phosphorylation (GO:0006468))
gwf2_scaffold_33_72
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(88227..88985)
-----------------
DNA (759bp)
protein (253aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=planctomycete KSU-1 RepID=I3IRJ9_9PLAN
4-diphosphocytidyl-2C-methyl-D-erythritol kinase Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=196 to=217 evalue=NA)
gwf2_scaffold_33_73
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(89033..90244)
-----------------
DNA (1212bp)
protein (404aa)
hypothetical protein; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] Tax=PER_GWF2_39_17
Bifunctional enzyme IspD/IspF n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TDA0_PARBH
hypothetical protein
seg (db=Seg db_id=seg from=343 to=356)
gwf2_scaffold_33_74
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

90402..91241
-----------------
DNA (840bp)
protein (280aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=34 to=45)
gwf2_scaffold_33_75
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

91380..92000
-----------------
DNA (621bp)
protein (207aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_76
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(92025..93059)
-----------------
DNA (1035bp)
protein (345aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase, 1-deoxy-D-xylulose-5-phosphate reductoisomerase {ECO:0000313|EMBL:KKR09238.1}; EC=1.1.1.267 {ECO:0000313|EMBL:KKR09238.1};; TaxID=1619067 species="Bact
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Dialister micraerophilus RepID=F2BV30_9FIRM
seg (db=Seg db_id=seg from=6 to=17)
gwf2_scaffold_33_77
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(93155..94294)
-----------------
DNA (1140bp)
protein (380aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=PER_GWF2_39_17
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Caloramator australicus RC3 RepID=I7LJ91_9CLOT rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
seg (db=Seg db_id=seg from=70 to=84)
gwf2_scaffold_33_78
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

94384..96132
-----------------
DNA (1749bp)
protein (583aa)
transmembrane_regions Tax=PER_GWF2_39_17
GDP-mannose 4,6 dehydratase ISS
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
gwf2_scaffold_33_79
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

96277..98109
-----------------
DNA (1833bp)
protein (611aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=PER_GWF2_39_17
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase (Glutamine-hydrolyzing) n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHL3_LEPBA rbh
GMP SYNTHASE (db=HMMPanther db_id=PTHR11922:SF2 from=7 to=499 evalue=1.2e-173)
gwf2_scaffold_33_80
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

98178..98660
-----------------
DNA (483bp)
protein (161aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_81
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(98655..99794)
-----------------
DNA (1140bp)
protein (380aa)
Integral membrane protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPA4_METAC
hypothetical protein Tax=PER_GWF2_39_17
Membrane-associated phospholipid phosphatase
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwf2_scaffold_33_82
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(99815..100633)
-----------------
DNA (819bp)
protein (273aa)
Glutamate racemase, glutamate racemase {ECO:0000313|EMBL:KKR25880.1}; EC=5.1.1.3 {ECO:0000313|EMBL:KKR25880.1};; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacteri
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FAA8_9DELT
ASP_GLU_RACEMASE_2 (db=PatternScan db_id=PS00924 from=183 to=193 evalue=0.0 interpro_id=IPR018187 interpro_description=Asp/Glu racemase, active site GO=Molecular Function: racemase and epimerase activity, acting on amino acids and derivatives (GO:0016855))
gwf2_scaffold_33_83
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

100771..101535
-----------------
DNA (765bp)
protein (255aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Ag1 RepID=J0PC91_9PSED
Uncharacterized protein Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=160 to=182)
Voltage-gated potassium channels (db=superfamily db_id=SSF81324 from=134 to=254 evalue=1.5e-11)
gwf2_scaffold_33_84
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(101570..102196)
-----------------
DNA (627bp)
protein (209aa)
Peptidase M50 n=1 Tax=Geobacter sp. (strain FRC-32) RepID=B9M314_GEOSF
peptidase M50 Tax=PER_GWF2_39_17
peptidase M50
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_33_85
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

102361..104289
-----------------
DNA (1929bp)
protein (643aa)
S-layer glycoprotein, contains three N-terminal SLH domains n=2 Tax=Bacillus RepID=D3FZN5_BACPE
S-layer protein {ECO:0000313|EMBL:KKR09247.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
slpA; S-layer protein
seg (db=Seg db_id=seg from=13 to=25)
gwf2_scaffold_33_86
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(104364..106724)
-----------------
DNA (2361bp)
protein (787aa)
Cell wall-associated hydrolase containing three SLH domains n=2 Tax=Planococcus RepID=E7RL88_9BACL
hydrolase Tax=PER_GWF2_39_17
cell wall-associated hydrolase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_33_87
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

107448..108407
-----------------
DNA (960bp)
protein (320aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=12 to=24)
gwf2_scaffold_33_88
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(108532..108738)
-----------------
DNA (207bp)
protein (69aa)
PROKAR_LIPOPROTEIN Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=31 to=50)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=7.0)
gwf2_scaffold_33_89
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(108781..109455)
-----------------
DNA (675bp)
protein (225aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=201 to=222 evalue=NA)
seg (db=Seg db_id=seg from=27 to=33)
gwf2_scaffold_33_90
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(109646..110461)
-----------------
DNA (816bp)
protein (272aa)
Protein of unknown function DUF1795 Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=64)
seg (db=Seg db_id=seg from=51 to=62)
(db=HMMPfam db_id=PF08786 from=169 to=260 evalue=2.2e-06 interpro_id=IPR014894 interpro_description=Protein of unknown function DUF1795)
Displaying items 61-90 of 206 in total

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