ggKbase home page

RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_31
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(47805..48239)
-----------------
DNA (435bp)
protein (145aa)
Hydrogenase 4 subunit 5 Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
F420H2 dehydrogenase subunit C id=2183079 bin=GWE2_Bacteroidetes_32_14 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
Hydrogenase 4 subunit 5
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_32
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(48251..48676)
-----------------
DNA (426bp)
protein (142aa)
mbh10 NADH dehydrogenase subunit n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039D2CD2
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
NADH ubiquinone oxidoreductase 20 kDa subunit
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_33
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(48677..49585)
-----------------
DNA (909bp)
protein (303aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5B887
cooK; carbon monoxide-induced hydrogenase subunit CooK Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
cooK; carbon monoxide-induced hydrogenase subunit CooK
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_34
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(49587..50120)
-----------------
DNA (534bp)
protein (178aa)
formate dehydrogenase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A3586E
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_35
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(50123..50950)
-----------------
DNA (828bp)
protein (276aa)
oxidoreductase FAD/NAD(P)-binding domain protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Oxidoreductase FAD/NAD(P)-binding domain protein id=2183085 bin=GWE2_Bacteroidetes_32_14 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
oxidoreductase FAD/NAD(P)-binding domain protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_36
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(50955..51965)
-----------------
DNA (1011bp)
protein (337aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4B508
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_37
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(52099..52818)
-----------------
DNA (720bp)
protein (240aa)
GAF sensor protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Putative uncharacterized protein id=4321154 bin=GWC2_OP3_44_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
GAF sensor protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_38
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(52815..53840)
-----------------
DNA (1026bp)
protein (342aa)
radical SAM protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Radical SAM domain protein id=2323554 bin=GWA2_Elusi_like_61_42 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
radical SAM protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_39
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(53833..54099)
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TBM2_METSL
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_40
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(54093..54887)
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0Y0_GRAMM
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_41
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(54917..56029)
-----------------
DNA (1113bp)
protein (371aa)
HD-GYP domain-containing protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Metal dependent phosphohydrolase id=4137997 bin=GWA2_Elusi_like_61_42 species=Marinobacter hydrocarbonoclasticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
metal dependent phosphohydrolase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_42
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(56090..58162)
-----------------
DNA (2073bp)
protein (691aa)
putative histidine kinase (EC:2.7.13.3) Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase, contains GAF domain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBW7_9BACT
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_43
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(58263..59600)
-----------------
DNA (1338bp)
protein (446aa)
Cobalamin B12-binding domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBN5_9CLOT
cobalamin B12-binding domain-containing protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
cobalamin B12-binding domain-containing protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_44
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(59601..60401)
-----------------
DNA (801bp)
protein (267aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
UBA/THIF-type NAD/FAD binding protein id=4782945 bin=GWC2_Pelobacter_58_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_45
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(60398..60958)
-----------------
DNA (561bp)
protein (187aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKW9_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_46
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(60975..62372)
-----------------
DNA (1398bp)
protein (466aa)
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J684_DESRM
beta-ketoacyl synthase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_47
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(62549..63940)
-----------------
DNA (1392bp)
protein (464aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
two component system response regulator, sigma54-specific id=14627447 bin=bin7_NC10_sister species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
two component, sigma54 specific, Fis family transcriptional regulator
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_48
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

64134..65960
-----------------
DNA (1827bp)
protein (609aa)
glmS; glucosamine 6-phosphate synthetase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Leptonema illini DSM 21528 RepID=H2CI35_9LEPT
glmS; glucosamine 6-phosphate synthetase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_49
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

65985..66236
-----------------
DNA (252bp)
protein (84aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_50
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

66244..66930
-----------------
DNA (687bp)
protein (229aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Thermoanaerobacter RepID=D3T3C4_THEIA
winged helix family two component transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_cura
winged helix family two component transcriptional regulator
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_51
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

67079..68173
-----------------
DNA (1095bp)
protein (365aa)
carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Carbamoyl-phosphate synthase small chain id=4202422 bin=GWF2_OP3_43_52 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
carbamoyl phosphate synthase small subunit
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_52
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

68183..69832
-----------------
DNA (1650bp)
protein (550aa)
carbamoyl-phosphate synthase, large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00036B162E
carbamoyl-phosphate synthase, large subunit
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_53
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

69957..71345
-----------------
DNA (1389bp)
protein (463aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
amidophosphoribosyltransferase (EC:2.4.2.14)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00038275AE
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_54
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

71357..72952
-----------------
DNA (1596bp)
protein (532aa)
CTP synthase; K01937 CTP synthase [EC:6.3.4.2] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0N5_THEOJ
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_55
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

73103..74215
-----------------
DNA (1113bp)
protein (371aa)
Extracellular ligand-binding receptor n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E7A1_9FIRM
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
extracellular ligand-binding receptor
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_56
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

74321..75211
-----------------
DNA (891bp)
protein (297aa)
livH; high-affinity branched-chain amino acid ABC transporter permease Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=1843333 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
livH; high-affinity branched-chain amino acid ABC transporter permease
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_57
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

75208..76188
-----------------
DNA (981bp)
protein (327aa)
branched-chain amino acid ABC transporter permease/ATP-binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Putative High-affinity branched-chain amino acid transport system permease protein livM (LIV-I protein M) id=1843329 bin=GWA2_Elusimicrobia_66_18 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
branched-chain amino acid ABC transporter permease/ATP-binding protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_58
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

76292..77050
-----------------
DNA (759bp)
protein (253aa)
sugar ABC transporter ATPase (EC:3.6.3.17); K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Monosaccharide-transporting ATPase (EC:3.6.3.17)
ABC transporter related id=1843325 bin=GWA2_Elusimicrobia_66_18 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_59
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

77137..77859
-----------------
DNA (723bp)
protein (241aa)
ABC transporter related protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF01_THET1
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
ABC transporter
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_121_60
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

78014..79351
-----------------
DNA (1338bp)
protein (446aa)
Membrane-bound serine protease n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJM0_THEYD
membrane-bound serine protease; K07403 membrane-bound serine protease (ClpP class) Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
membrane-bound serine protease
Displaying items 31-60 of 63 in total

View Taxonomy