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13_1_20cm_4_scaffold_183239_2

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(372..1244)

Top 3 Functional Annotations

Value Algorithm Source
trpB; tryptophan synthase subunit beta (EC:4.2.1.20) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 289.0
  • Bit_score: 517
  • Evalue 9.60e-144
Tryptophan synthase beta chain id=4059712 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 289.0
  • Bit_score: 512
  • Evalue 2.90e-142
trpB1; tryptophan synthase subunit beta similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 289.0
  • Bit_score: 416
  • Evalue 8.00e-114

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 873
GTGATCGCCGAGACCGGCGCCGGCCAGCACGGCGTGGCCACGGCCACCGCCGCCGCGCTGCTCGGGCTCGAGTGCGCGGTGTACATGGGCACGGAGGACATCGAGCGCCAGGCGCTCAACGTCTTCCGGATGCGGCTGCTCGGGGCCAAGGTCATCCCGGTGGAGTCGGGGAGCAAGACGCTGAAGGACGCGGTGAACGAGGCGCTGCGCGACTGGGTCACCAACGTCCGCACCACGTACTACCTGCTCGGCTCGGCGCTCGGCCCGCACCCCTATCCCATGATGGTGCGCGACTTCCACACCGTGATCGGCAAGGAGGCGAGGGCGCAAGCGCGGCGCGCCATCGGCCGGCTGCCGGACGTCGTCGTCGCCTGCGTGGGTGGCGGCAGCAACGCCATCGGGTTGTTCCACCCGTTCGTCACCGACCGCCGGGTGGGCATCGTCGGCGTCGAGCCGGGCGGCAGCGGGATCGCCAGCGGCAAGCACGGCGCCTCGATGACCGCGGGCGCGGTCGGCGTGCTGCACGGCTCGATGAGCTACCTGCTGCAGAACGACGACGGCCAGGTGGCCGTCGCGCACTCGATCTCGGCCGGCCTGGATTACCCCGGCGTCGGCCCCGAGCACGCCTACTATAAGGATGCCGGCCGCTTCGCGTTCGTGTCGATCACCGACGAGGAGGCGCTCGAGGGCTTCCAGGCGCTCACGCGGCTGGAGGGGATCATGCCCGCCCTCGAGTCGGCCCACGCCGTGGCCCACGCGATGCGCCTGGCCAAGACCCTGCCGAAGTCGAAGGCCATCGTGGTCGGTCTGTCCGGGCGCGGCGACAAGGACGTCCACGTCGTGGCGAAGGCGCTCGGCATGGAGCTCCAATGA
PROTEIN sequence
Length: 291
VIAETGAGQHGVATATAAALLGLECAVYMGTEDIERQALNVFRMRLLGAKVIPVESGSKTLKDAVNEALRDWVTNVRTTYYLLGSALGPHPYPMMVRDFHTVIGKEARAQARRAIGRLPDVVVACVGGGSNAIGLFHPFVTDRRVGIVGVEPGGSGIASGKHGASMTAGAVGVLHGSMSYLLQNDDGQVAVAHSISAGLDYPGVGPEHAYYKDAGRFAFVSITDEEALEGFQALTRLEGIMPALESAHAVAHAMRLAKTLPKSKAIVVGLSGRGDKDVHVVAKALGMELQ*