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13_1_20cm_4_scaffold_28743_4

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(3773..4495)

Top 3 Functional Annotations

Value Algorithm Source
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 240.0
  • Bit_score: 438
  • Evalue 6.20e-120
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=3879942 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 241.0
  • Bit_score: 436
  • Evalue 1.70e-119
  • rbh
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 237.0
  • Bit_score: 316
  • Evalue 9.30e-84

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGGAAGGGCTCGTCGCGCAGGGGCTGGTGAAGTGGTTCAAGAGCCGGAAGGTCGTCGACAACGTGTCGCTCGACATCCAGCGCGGAGAGGTCGTCGGCCTGCTGGGCCCGAACGGCGCGGGCAAGACCACGTCGTTCTACATGATGGTGGGACTCCTGCCGACGGACGGCGGCCGGATCTTCCTCGAGGGGGCGGAGATCTCGCGTCTGCCCATGTACCAGCGCTGCCGCATGGGCATCGGCTACCTGCCGCAGGAGTCGTCGGTCTTCCGCAAGCTCACCGTCGAGGAGAATTTGCTGGCGATCCTCGAGACGCTCGAGCTGTCGAGCGGCGAGCGACGGCAGCGCGCGCGTGAGCTCCTCGCGGAGCTCGACCTGACGGCGCTGGCGCCCTATCCCGCCTACACGCTCTCGGGCGGCGAGCGGCGACGGCTCGAGATCACGCGGGCGCTCGTCACCGCGCCGCAGTACCTGTTGCTCGACGAGCCGTTCACGGGCATCGACCCGATCGCGATCGGCGACATCCAGGAGATCGTCGGCCGGCTGCGCGAGCGTGGCATCGGGATCCTCGTCACGGACCACAACGTGCGCGAGACGCTCGCGATCACCGATCGCGCCTACATCCTCTACGACGGCAGAATTCTCGTCTCCGGCACCGCCGCCGAGATCGTCAACAACCCGGTCGCGCGCGAGATCTACCTCGGCGACCGGTTTGCCCTCTAG
PROTEIN sequence
Length: 241
MEGLVAQGLVKWFKSRKVVDNVSLDIQRGEVVGLLGPNGAGKTTSFYMMVGLLPTDGGRIFLEGAEISRLPMYQRCRMGIGYLPQESSVFRKLTVEENLLAILETLELSSGERRQRARELLAELDLTALAPYPAYTLSGGERRRLEITRALVTAPQYLLLDEPFTGIDPIAIGDIQEIVGRLRERGIGILVTDHNVRETLAITDRAYILYDGRILVSGTAAEIVNNPVAREIYLGDRFAL*