ggKbase home page

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_42229_4

Organism: Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_19

partial RP 36 / 55 MC: 2 BSCG 37 / 51 MC: 1 ASCG 10 / 38
Location: comp(2695..3402)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 236.0
  • Bit_score: 283
  • Evalue 2.50e-73
High-affinity branched-chain amino acid transport ATP-binding protein livF (LIV-I protein F) id=2304938 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 230.0
  • Bit_score: 270
  • Evalue 1.60e-69
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 233.0
  • Bit_score: 253
  • Evalue 5.50e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGGCTGAGGCGCTGGCCCTCGATCATGTCAACACCTACTACGGCGAGAGCCACATCCTGCACGATGTCTCGTTCGCGCTCCCGGCGGGCCGGGTGCTGGCCCTCCTCGGGCGCAACGGCGTGGGCAAGACCACGACCATCCGGTCGATCATCGGCTTCACCCCGCCGCGCCGGGGCGAGATCCGGCTGTGGGGCGAGCCGATCGCGCGGCTGGTTCCCGAAGTCGTGGCGCGGAAAGGCATCGGGCTGGTCCCGCAGGGCCGCGCCGTCTTCCCGAGCCTGACGGTGCGGGAGAACCTGACGGTGGCCGCGCGCGGCGCGGCCGGAGCGCGCTGGACGGTCGAGAGCGTCGTCGAGGTCTTCCCGCGCCTGGCCGGGCGCCAGCGCCAGCTCGGGGGCACGCTGTCGGGCGGCGAGCAGCAGATGCTCGCCATCGGGCGCGCGCTCATGACCAACCCCCGGGTGCTGCTGATGGACGAACCGTCGGAGGGGCTCGCCCCGACCATCGTGGCCGAGGTCCATCGCGTGCTGCTCGAGCTCAAAGCGGGCGGGCTCTCGATCCTGCTGGTCGAGCAGAACACCCGGCTCGCGCTCTCGGTGGCCGATGCCGTGGTCATCCTCGACAGGGGCCGCGTGGTCTTCGCGGGCGACCCGGCGGCGATTCGCGACGACGAGCGGTTCCTCGCGCTCCACCTGGGCGTCCACTGA
PROTEIN sequence
Length: 236
VAEALALDHVNTYYGESHILHDVSFALPAGRVLALLGRNGVGKTTTIRSIIGFTPPRRGEIRLWGEPIARLVPEVVARKGIGLVPQGRAVFPSLTVRENLTVAARGAAGARWTVESVVEVFPRLAGRQRQLGGTLSGGEQQMLAIGRALMTNPRVLLMDEPSEGLAPTIVAEVHRVLLELKAGGLSILLVEQNTRLALSVADAVVILDRGRVVFAGDPAAIRDDERFLALHLGVH*