ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_22282_1

Organism: Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_19

partial RP 36 / 55 MC: 2 BSCG 37 / 51 MC: 1 ASCG 10 / 38
Location: comp(2..805)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, 4TM/12TM fusion protein Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 268.0
  • Bit_score: 527
  • Evalue 1.50e-146
Trap transporter, 4tm/12tm fusion protein id=4840560 bin=GWC2_Methylomirabilis_70_16 species=Silicibacter sp. TrichCH4B genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 455
  • Evalue 3.90e-125
TRAP transporter, 4TM/12TM fusion protein similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 270.0
  • Bit_score: 213
  • Evalue 5.50e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 804
GTGACGCAGCCCAAGGCCGGGATCATCTACGGCCTGGCCGTGTCCATGGCCACCTTCCACCTCTATGCCGGGTACTTCGGCCAGCCGGAGGCGCAGGTCTTTCGCGCGACCCACGTGGGCTTCGCCATGAGCCTGGCCTTCCTGCTCTTCCCGTGCTCGCGGGGGCTCGAGCGGCGGGCGCCGGCGCGGAGCGAGGCGCTCGACTTGGGGCTCGTGGCGCTGGTGGCGGCGCTCCACGTCTACATCCTGCGCGACCCGCAGGGGCTGTGGCTGCGCACGGGCCAGCTCACCACGGCGGACCTGATCGTGGCCACCCTGTACCTCCTGGTGCTGCTGGAGGCCACGCGGCGCGCGGTGGGGCTCGCCATGCTGGCCGTGGCGGGGTTCTTCATCGTCAACGCCATCGCCGGCCACTGGTTCCCCGGGATCTTCTACGGACCCCCCCATCACTGGCGAGTGGTGGCCAATGCGCTCTTTCTGGGGGACGACGGGGTCTTCGGCATCCCGGTGGCCGCCTCCGCCAGCTACATCGTGCTGTTCATCATCTTCGGCCAGCTCCTCCAGAAATCGCGGGCCCTCGACTTCTTCATGAGCCTGGCGCTCACGCTGACGGGCCAGCAGGCGGGGGGGCCCGCCAAGGCGGCCGTCGTGGCGAGCGCCTTCGAGGGCACCTACACCGGCAGCGCCGTGGCCAACGTGGTGGGCTCGGGCACCTTCACCATCCCGCTCATGAAGCGGCTCGGCTACCCGGCCCACTTCGCGGGCGCCGTCGAGGCCGTGGCCTCGTCCGGCGGCCAGATCATG
PROTEIN sequence
Length: 268
VTQPKAGIIYGLAVSMATFHLYAGYFGQPEAQVFRATHVGFAMSLAFLLFPCSRGLERRAPARSEALDLGLVALVAALHVYILRDPQGLWLRTGQLTTADLIVATLYLLVLLEATRRAVGLAMLAVAGFFIVNAIAGHWFPGIFYGPPHHWRVVANALFLGDDGVFGIPVAASASYIVLFIIFGQLLQKSRALDFFMSLALTLTGQQAGGPAKAAVVASAFEGTYTGSAVANVVGSGTFTIPLMKRLGYPAHFAGAVEAVASSGGQIM