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Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_19

RIFCSPLOWO2_12_FULL_GWC2_Rokubacteria_70_16_curated_71_18

Consensus taxonomy: GWC2_Rokubacteria_70_16_curated  →  Rokubacteria  →  Bacteria

Displaying items 1-50 of 377 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_65513
Species: GWC2_Rokubacteria_70_16_curated (100%)
7 4941 bp 70.80 17.76 93.50
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_33086
Species: GWC2_Rokubacteria_70_16_curated (100%)
9 4989 bp 70.54 17.76 93.02
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_42332
Species: GWA2_Rokubacteria_70_23_curated (100%)
7 4989 bp 66.23 17.76 88.27
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_46472
Species: GWC2_Rokubacteria_70_16_curated (87.5%)
8 4999 bp 69.39 17.76 79.88
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_31641
Species: GWC2_Rokubacteria_70_16_curated (100%)
8 5041 bp 71.71 17.76 90.82
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_32931
Species: GWC2_Rokubacteria_70_16_curated (100%)
5 5054 bp 71.05 17.76 96.76
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_33010
Species: GWC2_Rokubacteria_70_16_curated (80%)
5 5069 bp 69.48 17.76 90.55
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_33013
Species: GWC2_Rokubacteria_70_16_curated (66.67%)
3 5071 bp 73.63 17.76 92.53
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_55645
Species: GWC2_Rokubacteria_70_16_curated (100%)
5 5076 bp 68.58 17.76 90.01
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_32794
Species: GWA2_Rokubacteria_70_23_curated (100%)
7 5087 bp 69.06 17.76 94.95
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_190625
Species: GWC2_Rokubacteria_70_16_curated (75%)
8 5113 bp 67.57 17.76 96.46
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_32389
Species: GWA2_Rokubacteria_73_35_curated (100%)
4 5117 bp 69.10 17.76 89.99
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_42229
Species: GWA2_Rokubacteria_70_23_curated (66.67%)
6 5172 bp 70.13 17.76 83.93
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_31116
Species: GWC2_Rokubacteria_70_16_curated (85.71%)
7 5208 bp 69.49 17.76 95.68
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_31434
Species: GWC2_Rokubacteria_70_16_curated (83.33%)
6 5223 bp 71.22 17.76 82.71
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_140579
Species: GWA2_Rokubacteria_70_23_curated (87.5%)
8 5227 bp 70.21 17.76 90.91
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_81018
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 5260 bp 68.95 17.76 86.52
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_30940
Species: GWC2_Rokubacteria_70_16_curated (100%)
5 5268 bp 71.58 17.76 92.77
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_143651
Species: GWC2_Rokubacteria_70_16_curated (71.43%)
7 5281 bp 69.72 17.76 90.10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_48429
Class: Alphaproteobacteria (50%)
6 5285 bp 70.99 17.76 95.25
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_46955
Species: GWC2_Rokubacteria_70_16_curated (100%)
5 5309 bp 65.44 17.76 90.47
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34966
Species: GWC2_Rokubacteria_70_16_curated (100%)
5 5315 bp 71.85 17.76 97.65
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_179589
Species: GWA2_Rokubacteria_70_23_curated (75%)
8 5325 bp 70.27 17.76 98.82
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_33164
Species: GWC2_Rokubacteria_70_16_curated (100%)
7 5328 bp 71.58 17.76 97.64
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_67574
Phylum: Rokubacteria (60%)
5 5334 bp 71.39 17.76 70.25
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_78266
Species: GWA2_Rokubacteria_70_23_curated (83.33%)
6 5346 bp 72.13 17.76 80.70
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_30033
Phylum: Rokubacteria (80%)
5 5360 bp 71.96 17.76 96.16
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_30042
Species: GWC2_Rokubacteria_70_16_curated (100%)
6 5365 bp 67.44 17.76 85.05
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_95023
Species: GWA2_Rokubacteria_70_23_curated (62.5%)
8 5381 bp 70.75 17.76 85.63
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_37783
Species: GWC2_Rokubacteria_70_16_curated (83.33%)
6 5390 bp 70.67 17.76 90.61
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27868
Phylum: Rokubacteria (71.43%)
7 5392 bp 71.72 17.76 92.53
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_29239
Species: GWC2_Rokubacteria_70_16_curated (60%)
5 5405 bp 68.01 17.76 100.02
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_29298
Species: GWC2_Rokubacteria_70_16_curated (80%)
5 5409 bp 71.14 17.76 99.28
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_78136
Species: GWA2_Rokubacteria_70_23_curated (60%)
10 5429 bp 67.16 17.76 80.18
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_116495
Species: GWC2_Rokubacteria_70_16_curated (75%)
4 5431 bp 68.50 17.76 97.00
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_125185
Species: GWC2_Rokubacteria_70_16_curated (100%)
7 5440 bp 70.61 17.76 89.12
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_40549
Domain: Bacteria (66.67%)
9 5443 bp 71.01 17.76 82.62
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_82379
Species: GWA2_Rokubacteria_70_23_curated (55.56%)
9 5445 bp 69.53 17.76 86.06
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_142813
Species: GWC2_Rokubacteria_70_16_curated (75%)
4 5450 bp 68.68 17.76 74.37
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_76426
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 5466 bp 69.47 17.76 82.71
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_29013
Species: GWC2_Rokubacteria_70_16_curated (87.5%)
8 5467 bp 72.05 17.76 93.01
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_29103
Species: GWC2_Rokubacteria_70_16_curated (85.71%)
7 5468 bp 70.48 17.76 93.38
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_51826
Species: GWA2_Rokubacteria_70_23_curated (85.71%)
7 5480 bp 69.73 17.76 69.53
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_47767
Species: GWC2_Rokubacteria_70_16_curated (71.43%)
7 5490 bp 72.06 17.76 81.80
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_80854
Species: GWC2_Rokubacteria_70_16_curated (50%)
6 5496 bp 69.40 17.76 75.93
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_35019
Phylum: Rokubacteria (57.14%)
7 5513 bp 69.94 17.76 71.56
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28383
Species: GWC2_Rokubacteria_70_16_curated (85.71%)
7 5529 bp 71.50 17.76 85.73
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_49572
Species: GWC2_Rokubacteria_70_16_curated (100%)
4 5546 bp 72.29 17.76 87.63
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_39770
Species: GWC2_Rokubacteria_70_16_curated (85.71%)
7 5577 bp 72.75 17.76 95.80
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_37018
Species: GWA2_Rokubacteria_70_23_curated (100%)
6 5596 bp 69.28 17.76 91.62
Displaying items 1-50 of 377 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.