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PLM4_32_b1_sep16_scaffold_7514_3

Organism: PLM4_32_b1_sep16_Rokubacteria_71_14

near complete RP 50 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 1994..2581

Top 3 Functional Annotations

Value Algorithm Source
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 193.0
  • Bit_score: 136
  • Evalue 1.70e-29
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 188.0
  • Bit_score: 128
  • Evalue 1.30e-27
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 193.0
  • Bit_score: 152
  • Evalue 3.20e-34

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGATGTCACGCTCCCCGGACCACCGCCCACCGCCCGATGGAGACGCGCGCCTGATCGATGCGCTCCGGCGAGGTGCCCCGGGAGCGGCCGACGCGCTCGTCGAAGCGTACGGCTCGCGCATCTACCGCAACGTGAACCGGATCCTGACCAACCGCGCGGATGCGGAAGAGGTCGCCCAGGACGTCCTGTTGACGATCGTCCGGCGGATCCAGTCGTTCGGGGAGCGGTCCACCTTCGCGACGTGGGTTCACCGCGTCGCCACCAATGCGGCCCTCGCCCGACTGCGGCGCCGCAAGCGGGACGACGCCCACGCGGCCGCCGTCCCCGCGATGCCCGCCCTCCTCGGCGGCCACGTGACCCGCGCCGACGAAGAGCTGGCCCGCCGCGAGCTGGGTGGCGTGCTCGAGCGGGCGATCGAGACGTTGCCGGAGCCCTACCGGCTCCCGCTGGTCCTCTGTCATCTCGAGGGGCTGTCGACCGCCGCCATCGCCGACCGGCTGGGTCTGGGCCGGGCGGCGGTGAAGTCGCGGGTCTACCGCTCCCGGTTGCTGATCCGCGCGAGCCTCGCCGCGTACGTCGCGGCGTGA
PROTEIN sequence
Length: 196
MMSRSPDHRPPPDGDARLIDALRRGAPGAADALVEAYGSRIYRNVNRILTNRADAEEVAQDVLLTIVRRIQSFGERSTFATWVHRVATNAALARLRRRKRDDAHAAAVPAMPALLGGHVTRADEELARRELGGVLERAIETLPEPYRLPLVLCHLEGLSTAAIADRLGLGRAAVKSRVYRSRLLIRASLAAYVAA*