ggKbase home page

PLM3_127_b1_sep16_scaffold_8000_6

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(4614..5210)

Top 3 Functional Annotations

Value Algorithm Source
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 157.0
  • Bit_score: 145
  • Evalue 6.80e-32
Putative histidine--tRNA ligase Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MH43_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 157.0
  • Bit_score: 145
  • Evalue 4.80e-32
histidine--tRNA ligase similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 164.0
  • Bit_score: 139
  • Evalue 5.70e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoramibacter alactolyticus → Pseudoramibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 597
GACCTCCTGGCCTCGAGCGCGACGCCGGCTGCGCTGCGCGGGCTCCTGGGGGCGCGGGGGGACGAGGGCGTGTGGCGCGGCCTGCAGCGCATCCTCGACACGGTCGAGACGCAGGCGGCCGGCCGCTTCCGGCTCGTGTTCGACGCGACCCTGGTGCGCGGGATGGGCTACTACACCGGGCCCATCTTCGAGGTGCAGCACGGCGGGAGCACCTCGTCGATCGCGGGGGGCGGGCGCTACGATCGGATGATCGGTAAGTTCATCGGACGGGATGTTCCCGCCACCGGCTTCTCGATCGGCTTCGAGCGCGTGATCTCGATCCTCCTGGAGCGCGGGCCGGCGACCGAAGCGGACGGCGAGCGGGTGGTGCTGGTCTTCGACGAGACCGAGCACGCCCTGGGGTCGGTGCTCGCCCTCGCCCGCGACCTGCGGGAGCAGGGCAAGCAGGTGCTGCTGGAGGCCCGGGCCAAGCGGCTCGGCAAGCAGCTCCAGGACCTCGAGGCCCGCGGATACCGAAAGATCGGCGTGCTGGGCGCCGGCGGCGCGGTGGAATGGCGCGAGGCCCGGGCGGGCGGGGCGGGGACGACGAGGGCGTGA
PROTEIN sequence
Length: 199
DLLASSATPAALRGLLGARGDEGVWRGLQRILDTVETQAAGRFRLVFDATLVRGMGYYTGPIFEVQHGGSTSSIAGGGRYDRMIGKFIGRDVPATGFSIGFERVISILLERGPATEADGERVVLVFDETEHALGSVLALARDLREQGKQVLLEARAKRLGKQLQDLEARGYRKIGVLGAGGAVEWREARAGGAGTTRA*