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PLM3_127_b2_sep16_Rokubacteria_68_9

PLM3_127cm_b2_sep2016_Rokubacteria_68_9
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  rokubacteria_ggkbase

Consensus taxonomy: Rokubacteria  →  Bacteria

Displaying items 501-550 of 674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_81330
Domain: Bacteria (50%)
4 3080 bp 67.47 8.13 70.62
PLM3_127_b2_sep16_scaffold_32115
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 2917 bp 67.71 6.32 94.00
PLM3_127_b2_sep16_scaffold_25396
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 3341 bp 68.42 9.43 94.82
PLM3_127_b2_sep16_scaffold_29501
Species: R_Rokubacteria_73_56 (50%)
4 3068 bp 65.22 10.02 87.81
PLM3_127_b2_sep16_scaffold_77751
Species: Candidatus Brocadia sinica (50%)
4 3049 bp 67.66 6.40 93.67
PLM3_127_b2_sep16_scaffold_21391
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 3688 bp 68.11 9.19 77.44
PLM3_127_b2_sep16_scaffold_18209
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 4047 bp 68.45 10.67 91.33
PLM3_127_b2_sep16_scaffold_35050
Phylum: Proteobacteria (50%)
4 2770 bp 66.68 13.16 72.13
PLM3_127_b2_sep16_scaffold_41379
Species: GWA2_Rokubacteria_70_23_curated (100%)
4 4292 bp 66.73 10.24 93.94
PLM3_127_b2_sep16_scaffold_63884
Species: GWA2_Rokubacteria_70_23_curated (100%)
4 3130 bp 65.75 9.01 82.14
PLM3_127_b2_sep16_scaffold_31175
Phylum: Proteobacteria (50%)
4 4251 bp 68.50 9.92 94.00
PLM3_127_b2_sep16_scaffold_21143
Species: R_Betaproteobacteria_64_14 (50%)
4 3713 bp 65.72 11.47 97.28
PLM3_127_b2_sep16_scaffold_43432
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 3600 bp 69.83 7.71 90.00
PLM3_127_b2_sep16_scaffold_57261
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 2756 bp 69.74 9.20 94.70
PLM3_127_b2_sep16_scaffold_40597
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 2544 bp 70.17 8.14 94.58
PLM3_127_b2_sep16_scaffold_38015
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 5483 bp 69.23 10.78 95.37
PLM3_127_b2_sep16_scaffold_112330
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 3936 bp 66.69 6.10 91.08
PLM3_127_b2_sep16_scaffold_14875
Phylum: Rokubacteria (75%)
4 5257 bp 69.74 9.07 99.58
PLM3_127_b2_sep16_scaffold_31190
Species: GWC2_Rokubacteria_70_16_curated (75%)
4 2970 bp 69.06 7.42 95.56
PLM3_127_b2_sep16_scaffold_30904
Domain: Bacteria (100%)
4 2985 bp 67.64 7.04 100.00
PLM3_127_b2_sep16_scaffold_19954
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 3839 bp 68.56 9.77 89.01
PLM3_127_b2_sep16_scaffold_99491
Phylum: Rokubacteria (75%)
4 3034 bp 70.47 8.90 75.15
PLM3_127_b2_sep16_scaffold_25428
Species: GWA2_Rokubacteria_73_35_curated (50%)
4 3337 bp 73.30 8.14 99.07
PLM3_127_b2_sep16_scaffold_27781
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 3176 bp 68.04 9.02 99.46
PLM3_127_b2_sep16_scaffold_73150
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 2955 bp 69.10 10.15 96.75
PLM3_127_b2_sep16_scaffold_49574
Phylum: Rokubacteria (75%)
4 3784 bp 67.84 6.86 88.72
PLM3_127_b2_sep16_scaffold_19194
Species: GWC2_Rokubacteria_70_16_curated (75%)
4 3927 bp 70.69 9.21 96.64
PLM3_127_b2_sep16_scaffold_28803
Species: GWC2_Rokubacteria_70_16_curated (75%)
4 3110 bp 67.11 10.32 91.06
PLM3_127_b2_sep16_scaffold_89029
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 3323 bp 68.73 5.42 62.93
PLM3_127_b2_sep16_scaffold_26100
Phylum: Rokubacteria (75%)
4 3291 bp 67.00 8.80 91.52
PLM3_127_b2_sep16_scaffold_46286
Phylum: Proteobacteria (50%)
4 3552 bp 66.53 9.21 81.76
PLM3_127_b2_sep16_scaffold_62903
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 3181 bp 72.65 8.16 100.35
PLM3_127_b2_sep16_scaffold_27543
Phylum: Proteobacteria (50%)
4 3193 bp 67.74 6.76 87.19
PLM3_127_b2_sep16_scaffold_41168
Phylum: Rokubacteria (50%)
4 2523 bp 70.31 9.93 86.80
PLM3_127_b2_sep16_scaffold_125905
Phylum: Rokubacteria (50%)
4 2792 bp 69.05 8.92 90.58
PLM3_127_b2_sep16_scaffold_30675
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 2998 bp 68.61 6.45 93.46
PLM3_127_b2_sep16_scaffold_16132
Species: RLO_Rokubacteria_71_22 (50%)
4 4345 bp 66.49 7.80 82.99
PLM3_127_b2_sep16_scaffold_58118
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 2615 bp 70.67 7.69 90.63
PLM3_127_b2_sep16_scaffold_22080
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 3621 bp 66.86 7.71 97.02
PLM3_127_b2_sep16_scaffold_17729
Species: GWA2_Rokubacteria_73_35_curated (100%)
4 4112 bp 69.75 10.21 96.81
PLM3_127_b2_sep16_scaffold_41434
Species: GWA2_Rokubacteria_70_23_curated (100%)
4 4266 bp 68.35 10.27 96.98
PLM3_127_b2_sep16_scaffold_69086
Domain: Bacteria (100%)
4 4703 bp 69.23 7.59 93.77
PLM3_127_b2_sep16_scaffold_34254
Species: GWC2_Rokubacteria_70_16_curated (75%)
4 2809 bp 69.92 6.30 99.22
PLM3_127_b2_sep16_scaffold_75514
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 3029 bp 70.12 6.29 71.01
PLM3_127_b2_sep16_scaffold_66253
Phylum: Rokubacteria (50%)
4 3428 bp 68.09 5.34 75.26
PLM3_127_b2_sep16_scaffold_58399
Phylum: Rokubacteria (50%)
4 3661 bp 67.41 8.48 96.29
PLM3_127_b2_sep16_scaffold_21471
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 3682 bp 68.63 9.78 94.51
PLM3_127_b2_sep16_scaffold_14941
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 4536 bp 67.84 6.98 95.70
PLM3_127_b2_sep16_scaffold_30197
Phylum: Rokubacteria (50%)
4 3028 bp 68.43 8.27 97.19
PLM3_127_b2_sep16_scaffold_13296
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 4844 bp 67.75 8.92 98.53
Displaying items 501-550 of 674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.