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S_scaffold_2113_3

Organism: S_Caldanaerobacter_subterraneus_34_81_partial

partial RP 32 / 55 BSCG 34 / 51 ASCG 10 / 38 MC: 1
Location: comp(2639..3127)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=DS1215_Thermoanaerobacter_34_5835 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 334
  • Evalue 6.50e-89
RNA polymerase sigma factor, sigma-70 family KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 162.0
  • Bit_score: 333
  • Evalue 2.90e-89
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 334
  • Evalue 1.50e-89

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Taxonomy

DS1215_Thermoanaerobacter_34_5835 → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 489
GTGAAAGATGGTTTTTTAAGCTTTTATGAAACTTTTTTTGACGATGTGTACCGGTACGTGTATTTTAAAGTAGGTAATAGCTGGGATGCCGATGACATCGTAAGTGAAATTTTTAAAAAAGCCTATGAAAATTATAGTACAATAAGAACCAATCCAAAGTCTTGGCTTTTCTCGATTGCAAGAAATACTGTCACAGACTTTTATAGAAAGAAGAAAGAAATTGTAACAAATGATGAACTTGAAAAATACTATTATCCGGATATTTGGGAGGACAAATTTAACAAAGAAGTAGAACTTAATTGCTTAAAAAAATCAATTTACAGCCTTCCAAAAAATGAAATTGAAATAATAAACTTAAAGTATTTTTCGGGAATGACCCATAAAGAAATATCACAGTTAATTGAAAAAACTGAAGATGCAGTAAAAATGAAAGCCCATAGGATTATTCAAAAATTAAAAAATCTTGTTATTAAATGTTTGGAGGGATGA
PROTEIN sequence
Length: 163
VKDGFLSFYETFFDDVYRYVYFKVGNSWDADDIVSEIFKKAYENYSTIRTNPKSWLFSIARNTVTDFYRKKKEIVTNDELEKYYYPDIWEDKFNKEVELNCLKKSIYSLPKNEIEIINLKYFSGMTHKEISQLIEKTEDAVKMKAHRIIQKLKNLVIKCLEG*