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SCN18_10_11_15_R5_P_scaffold_400_13

Organism: SCN18_10_11_15_R5_P_SCNPILOT_CONT_1000_P_Legionella_39_23-related_40_28

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 15617..16633

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EU42_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 342.0
  • Bit_score: 604
  • Evalue 6.50e-170
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 342.0
  • Bit_score: 604
  • Evalue 9.10e-170
rpoS; RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 341.0
  • Bit_score: 599
  • Evalue 4.50e-169

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Taxonomy

SCNPILOT_CONT_1000_P_Legionella_39_23 → Legionella → Legionellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGCAAGATGACGAAGAGTCAATTAAAAGCGCTGAAATCAAGGAGGAAGAGTGGTCTGAACCAGATGATGATTCTCTTTTGATTGAAGAGGAAGAGCTCCATACAATTACAGAAGAAGTGGAGGATTTTCCTGATTTTTCGGATGATGAGGCATTTCCCACATTTGGTCGGGGAAAAAATACCCTTAAGGCTATGGATGCAACTCAATTATACCTTGGCGAAATAGGCTTTTCCCCTCTACTTAGTGCAGAGGAAGAGGTTCACTATGCCACTTTGGCATTAAAAGGTGATATTGCTGCGCGTAAAAAAATGATTGAATCCAATTTACGCTTGGTTGTAAAAATTGCACGCCGCTATTTAAATCGTGGTCTGCCTTTATTGGATTTAATTGAAGAAGGAAATCTGGGACTGATGAAGTCAGTAGAGAAATTTGATCCTAAGCGGGGTTTTAGGTTTTCTACTTATGCTACTTGGTGGATACGTCAGACAATTGAGCGGGCAATAATGAATCAAACACGTACGATACGTTTGCCTATCCATGTCGTTAAGGAATTAAACGTTTATTTGCGTGCAGCACGGCAATTAACTCAAAAGCTGGATCATGAGCCTTCTCCAGAGGAAATAGCGGAGCTTGTAGATAGGCCCTTAGAGGATGTGCAAAAGCTTTTAGGGCTCAATGATAAAGTTACTTCCGTAGATACACCCATTGGCTTTGATGAAAATAAATCCTTGCTGGATACGATCGCTGATGAGAATAGTGTTAATCCTGCGGAACTATTAACGAATGAAAACTTAAGACAACATATTGAATCCTTACTTGATAAATTAACTGAAAATCAGCAGCAAGTGATTGCGCGTCGATTTGGTTTGCGAGGATTTGAAAAAGCAACGCTTGAAGATGTGGGTAAAGAAATTGATTTAACTCGAGAGCGCGTGCGGCAAATCCAAGTTGAAGCGTTAAAAACCTTGCGTAGCTTGCTTGAAAAAGTAGGACTGACTCAGGAAGATTTATTTTAA
PROTEIN sequence
Length: 339
MQDDEESIKSAEIKEEEWSEPDDDSLLIEEEELHTITEEVEDFPDFSDDEAFPTFGRGKNTLKAMDATQLYLGEIGFSPLLSAEEEVHYATLALKGDIAARKKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAELVDRPLEDVQKLLGLNDKVTSVDTPIGFDENKSLLDTIADENSVNPAELLTNENLRQHIESLLDKLTENQQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQVEALKTLRSLLEKVGLTQEDLF*