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SCN18_10_11_15_R5_P_SCNPILOT_CONT_1000_P_Legionella_39_23-related_40_28

SCN18_10_11_15_R5_P_unknown_41_27
In projects: SCN18_10_11_15_R5_P  |  scn18_genomes

Consensus taxonomy:

Displaying items 51-100 of 149 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_10_11_15_R5_P_scaffold_3417
Species: SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7 (50%)
4 2605 bp 43.88 21.02 77.85
SCN18_10_11_15_R5_P_scaffold_558
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (50%)
14 15581 bp 39.56 21.26 91.92
SCN18_10_11_15_R5_P_scaffold_248
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (71.79%)
39 48186 bp 39.30 21.29 91.67
SCN18_10_11_15_R5_P_scaffold_340
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (50%)
26 31864 bp 39.71 21.34 93.70
SCN18_10_11_15_R5_P_scaffold_1363
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (100%)
5 5594 bp 40.90 21.56 94.66
SCN18_10_11_15_R5_P_scaffold_927
Species: SCNpilot_P_inoc_Niastella_39_19 (100%)
8 8436 bp 37.06 21.94 71.34
SCN18_10_11_15_R5_P_scaffold_1031
Phylum: Proteobacteria (50%)
6 7526 bp 44.33 21.96 86.06
SCN18_10_11_15_R5_P_scaffold_482
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (61.9%)
21 19471 bp 39.00 22.77 85.62
SCN18_10_11_15_R5_P_scaffold_1628
Species: SCNpilot_P_inoc_Rhodobacter_64_50 (100%)
1 4779 bp 35.07 22.82 99.94
SCN18_10_11_15_R5_P_scaffold_1034
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (100%)
8 7521 bp 39.46 22.86 85.28
SCN18_10_11_15_R5_P_scaffold_564
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (66.67%)
18 15257 bp 39.51 22.88 83.10
SCN18_10_11_15_R5_P_scaffold_403
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (60.87%)
23 25149 bp 40.31 22.97 89.14
SCN18_10_11_15_R5_P_scaffold_294
Phylum: Proteobacteria (61.11%)
36 38086 bp 39.40 22.97 81.09
SCN18_10_11_15_R5_P_scaffold_515
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (73.68%)
19 17453 bp 40.11 23.16 91.98
SCN18_10_11_15_R5_P_scaffold_3168
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (100%)
2 2765 bp 37.40 23.22 61.84
SCN18_10_11_15_R5_P_scaffold_364
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (57.58%)
33 29537 bp 38.93 23.31 89.50
SCN18_10_11_15_R5_P_scaffold_90
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (66.91%)
136 159895 bp 39.96 23.48 94.27
SCN18_10_11_15_R5_P_scaffold_861
Phylum: Proteobacteria (72.73%)
11 9176 bp 34.29 23.57 94.32
SCN18_10_11_15_R5_P_scaffold_208
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (51.79%)
56 63039 bp 39.89 23.75 91.57
SCN18_10_11_15_R5_P_scaffold_3558
Species: Legionella oakridgensis (50%)
2 2529 bp 38.71 23.84 70.34
SCN18_10_11_15_R5_P_scaffold_380
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (88.89%)
27 27589 bp 40.69 24.27 91.52
SCN18_10_11_15_R5_P_scaffold_705
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (73.33%)
15 11464 bp 39.38 24.39 92.51
SCN18_10_11_15_R5_P_scaffold_1165
Class: Alphaproteobacteria (50%)
6 6467 bp 40.42 24.47 61.79
SCN18_10_11_15_R5_P_scaffold_522
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (66.67%)
12 16932 bp 38.92 24.59 87.47
SCN18_10_11_15_R5_P_scaffold_5563
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (100%)
2 1816 bp 41.91 24.61 99.12
SCN18_10_11_15_R5_P_scaffold_8439
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (50%)
2 1328 bp 44.13 24.62 98.72
SCN18_10_11_15_R5_P_scaffold_934
Species: SCNpilot_P_inoc_Niastella_39_19 (100%)
10 8384 bp 40.20 24.67 85.34
SCN18_10_11_15_R5_P_scaffold_1734
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (75%)
4 4541 bp 42.00 24.68 95.00
SCN18_10_11_15_R5_P_scaffold_366
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (85.71%)
28 29314 bp 40.61 24.78 92.16
SCN18_10_11_15_R5_P_scaffold_1007
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (66.67%)
9 7712 bp 40.09 24.97 87.23
SCN18_10_11_15_R5_P_scaffold_232
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (87.04%)
54 53670 bp 39.70 25.18 93.75
SCN18_10_11_15_R5_P_scaffold_9977
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (50%)
2 1170 bp 42.48 25.38 100.00
SCN18_10_11_15_R5_P_scaffold_324
Species: SCNpilot_P_inoc_Niastella_39_19 (100%)
13 33856 bp 43.96 25.44 96.21
SCN18_10_11_15_R5_P_scaffold_300
Genus: Legionella (50%)
34 36702 bp 39.31 26.01 90.80
SCN18_10_11_15_R5_P_scaffold_146
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (80.9%)
89 98092 bp 40.58 26.06 91.57
SCN18_10_11_15_R5_P_scaffold_470
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (83.33%)
24 19947 bp 41.34 26.12 92.49
SCN18_10_11_15_R5_P_scaffold_180
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (75.38%)
65 75786 bp 40.87 26.27 93.32
SCN18_10_11_15_R5_P_scaffold_400
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (95.45%)
22 25407 bp 41.46 26.47 92.36
SCN18_10_11_15_R5_P_scaffold_165
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (85.23%)
88 81368 bp 40.60 26.83 91.24
SCN18_10_11_15_R5_P_scaffold_561
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (85.71%)
14 15375 bp 41.04 26.87 95.85
SCN18_10_11_15_R5_P_scaffold_286
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (71.79%)
39 39856 bp 41.02 26.90 91.93
SCN18_10_11_15_R5_P_scaffold_907
Genus: Legionella (60%)
5 8685 bp 39.18 27.01 96.86
SCN18_10_11_15_R5_P_scaffold_1482
Class: Gammaproteobacteria (57.14%)
7 5219 bp 36.00 27.19 67.31
SCN18_10_11_15_R5_P_scaffold_669
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (54.55%)
11 12240 bp 40.94 27.30 89.56
SCN18_10_11_15_R5_P_scaffold_624
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (70%)
10 13375 bp 40.79 27.33 92.34
SCN18_10_11_15_R5_P_scaffold_393
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (97.14%)
35 25993 bp 41.09 27.76 95.23
SCN18_10_11_15_R5_P_scaffold_371
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (57.89%)
19 28662 bp 41.33 27.88 93.23
SCN18_10_11_15_R5_P_scaffold_101
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (70.08%)
127 143030 bp 40.99 27.91 92.10
SCN18_10_11_15_R5_P_scaffold_288
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (76.32%)
38 39739 bp 39.88 28.12 91.97
SCN18_10_11_15_R5_P_scaffold_447
Species: SCNPILOT_CONT_1000_P_Legionella_39_23 (58.82%)
17 21642 bp 39.65 28.15 90.89
Displaying items 51-100 of 149 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.