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SCN18_30_10_14_R3_B_scaffold_113_2

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(1513..2970)

Top 3 Functional Annotations

Value Algorithm Source
gabD; succinate-semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] id=12496001 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 485.0
  • Bit_score: 960
  • Evalue 5.10e-277
gabD; succinate-semialdehyde dehydrogenase I similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 483.0
  • Bit_score: 617
  • Evalue 2.30e-174
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 483.0
  • Bit_score: 757
  • Evalue 7.10e-216

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGAAACTCGCCGACGCCACGCTGTTCCGGCCGCAGATCCTGATCGGCGGCGTCTGGCAGGCTGCGCAGGACGGCACGTATTTCGACATCCGCAACCCGGCCAACGGCGAAATCGTCGGCACGGTCCCGCGCGGCACCGCCAGCGACGCCGGACGCGCCGTCGAGGCGGCTCACGCCGCCTTTCCGGACTGGCGCGACCGTACCGCGAAGGCGCGCGCCCAGCTCCTGCGCCGCTGGTTCGAGCTGATCCTCGCGCACCGCGACGACCTCGCGACGCTCATGGTGACCGAACAGGGCAAACCCCTGGCCGAAGCGCGTGGCGAGATCGACTACGCGGCGAGTTTCGTCGAATGGTTCGCCGAGGAAGCGCGCCGGGTCTATGGCGACGTGGTGCCGTCGCCCTGGGCGAACAGCCGGTTGTTCACCCTGCGCCGGCCGCTCGGCGTGGCGGCGCTGATCACGCCGTGGAATTTTCCCGCCGCGATGCTGACCCGGAAAGCCGCGGCCGCACTCGCCGCCGGTTGCACGGTCGTCGCCAAGCCCGCCTCGCAGACGCCTTTCACCGCACTGGCGCTGGCCGAGCTCGCGCAGCGCGCGGGCCTGCCGCCGGGCGTGCTGAACGTGATCACCGGCGACGCGGCGACCATCGGCAGCGTGCTGACCACGCATCCGCACGTCAGCAAGCTGTCATTCACCGGTTCGACCGCCGTCGGCAAACGGCTGCTCGCGCAAAGCGCCGCCACGCTCAAGCGCGTCTCGCTCGAACTCGGCGGCAATGCCCCCTTCATCGTGTTCGACGACGCCGACCTCGACGCCGCCGTGGAAGCCGCGCTTGCCAGTAAATACCGCAACGGCGGCCAGACCTGCGTATGCGCCAACCGGATGTTCGTGCAGGCCGGCGTGTACGACGCCTTTGCCGACCGGCTCGCTGACGCGGCGGCCCGTCTGAATGTCGCCGAAGGCTTCACCCCGGACGCGGAGATCGGCCCGCTGATCTCGACCGCCGCACGCGACAAGGTGGAGGCGCACGTCGCCGACGCGCTCGCGCGCGGCGCGACGCTTCTGGCCGGCGGCCACCGCCATGCGCGCGGCGGGCTGTTCTACGCGCCGACCGTGCTGAAGGACTGCACGCCCGACATGGCGCTCTGCCGCGACGAGACCTTCGGTCCGGTCGCGCCGCTGATCCGCTTCGACGACGAGGCCGACGCGATCCGTCTGGCGAACGATAGCGACTACGGACTGGCTGCCTACGCCTGCACGCGCGATCTCGCGCGCGCCTGGCGGCTGGCCGAACGCCTGGAGTACGGCATGGTCGGGCTCAATACCGGTGTGATCTCGACGGCGGAAGCCGCTTTCGGCGGCACCAAGCAGTCCGGGCTCGGCCGCGAAGGCGGCCGCACCGGCATCGACGCCTATCTGGAGGTCAAATATCTGGCACTGGGCGGCCTGGACGGTTGA
PROTEIN sequence
Length: 486
MKLADATLFRPQILIGGVWQAAQDGTYFDIRNPANGEIVGTVPRGTASDAGRAVEAAHAAFPDWRDRTAKARAQLLRRWFELILAHRDDLATLMVTEQGKPLAEARGEIDYAASFVEWFAEEARRVYGDVVPSPWANSRLFTLRRPLGVAALITPWNFPAAMLTRKAAAALAAGCTVVAKPASQTPFTALALAELAQRAGLPPGVLNVITGDAATIGSVLTTHPHVSKLSFTGSTAVGKRLLAQSAATLKRVSLELGGNAPFIVFDDADLDAAVEAALASKYRNGGQTCVCANRMFVQAGVYDAFADRLADAAARLNVAEGFTPDAEIGPLISTAARDKVEAHVADALARGATLLAGGHRHARGGLFYAPTVLKDCTPDMALCRDETFGPVAPLIRFDDEADAIRLANDSDYGLAAYACTRDLARAWRLAERLEYGMVGLNTGVISTAEAAFGGTKQSGLGREGGRTGIDAYLEVKYLALGGLDG*