ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1772_9

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(13081..13776)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=12498638 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 443
  • Evalue 7.70e-122
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 231.0
  • Bit_score: 420
  • Evalue 2.00e-115
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 231.0
  • Bit_score: 424
  • Evalue 5.20e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCTAACGTGTCCAAGCGCATGCGCGCGCTGAAAGAAAAAATCGACCGCACCCGCAGCTACGCCGTCATGGACGCGCTACAGCTGGTGAAGGAAACCGCAACCGCCAAATTCGACGAATCGGTTGACGTGGCTGTCAACCTGGGCATCGATGCCCGCAAATCGGACCAGATGGTGCGGGGCGCCGTCGTGCTGCCCAAGGGCATCGGCAAGACGGTTCGCGTCGCCGTGTTTGCCCAGGGCGACAACGCCCAGAAGGCGAAGGATGCCGGCGCGGACATCGTCGGTTTCGACGACCTGGCTGCCGAGATCAAGGGGGGGCGCATGGATTTCGATGTGGTCATCGCCACCCCCGACGCGATGCGTGTCGTCGGCCAGCTCGGCCAGGTGCTCGGTCCGCGCGGCCTGATGCCGAACCCCAAGGTCGGTACCGTGTCGCCCGACGTCGTGGGGGCGGTGAAGAACGCCAAGGCGGGCCAGGTGCAATACCGTACCGACAAGGGCGGTATCGTGCATTGCACCATCGGCCGCGCCTCGTTCAGTACGGACGACCTGAAGGAAAACCTGGTGGCCTTGCTGGATGCGCTGCAGCGCGCCAAGCCGGCCAGTTCGAAAGGTGTCTACTTCAAGCGTCTGTCCGTGTCTTCCACCATGGGCGTGGGCGTTCGGGTCGATCAGGCCAGCGTCGGCGCGTGA
PROTEIN sequence
Length: 232
MANVSKRMRALKEKIDRTRSYAVMDALQLVKETATAKFDESVDVAVNLGIDARKSDQMVRGAVVLPKGIGKTVRVAVFAQGDNAQKAKDAGADIVGFDDLAAEIKGGRMDFDVVIATPDAMRVVGQLGQVLGPRGLMPNPKVGTVSPDVVGAVKNAKAGQVQYRTDKGGIVHCTIGRASFSTDDLKENLVALLDALQRAKPASSKGVYFKRLSVSSTMGVGVRVDQASVGA*