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SCN18_25_1_16_R1_B_scaffold_416_23

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(18756..19157)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HQL6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 133.0
  • Bit_score: 150
  • Evalue 7.70e-34
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 116.0
  • Bit_score: 147
  • Evalue 2.40e-33
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 135.0
  • Bit_score: 152
  • Evalue 2.90e-34

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGTTCGGCAGGAAGAAAACCACTCCCGGTACCATCGACTGCCTGATCGGCGCAGGCACCGCGGTGCGCGGCGACATCCGCTTCAAGGGCGGGCTGCGCATCGACGGCAGCGTGTGCGGCAGCGTGATCGCCGAGGACGGCGCGCCCAGCATGCTGGTGCTCTCGGAAAGCGCGCGCATCGAGGGGGAGGTGCGCGCCGCGCACCTGGTCGTCAACGGCACCATCGTCGGCCCGGTGCAGGCCGACGAGCTGCTCGAGCTGCAGCCCAAGGCGCAGGTGACCGGCGAGATCCGCTATCGGGCCATCGAGATGCACCACGGCGCGGTGCTCGACGGATCGCTCGCGCACCTGGGCGAAGGCCGCGCCGGCCAACGGCTCGAGCTGGCTGCCAGCAACGAATGA
PROTEIN sequence
Length: 134
MFGRKKTTPGTIDCLIGAGTAVRGDIRFKGGLRIDGSVCGSVIAEDGAPSMLVLSESARIEGEVRAAHLVVNGTIVGPVQADELLELQPKAQVTGEIRYRAIEMHHGAVLDGSLAHLGEGRAGQRLELAASNE*