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SCN18_25_1_16_R1_B_scaffold_252_1

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(61..1596)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 495.0
  • Bit_score: 509
  • Evalue 4.60e-141
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 497.0
  • Bit_score: 498
  • Evalue 1.60e-138
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Burkholderia sp. SJ98 RepID=K8RCK5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 495.0
  • Bit_score: 509
  • Evalue 3.30e-141

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1536
GTGAACGCGCCGCCGTCGGTGGCGGCCGGCGCGGCGCACGTGTCAGCCCAGGGCGCGGGCGGGGCGGCCGGCGCGCCTGCCGCCGCTGCGCGCAGCGGCGCGCCGCACGGCGGCCCGACGCTCGAGCTCGAAGTCGCCTCGATCGACCTCGAGGCCAACGGCGTCGCGCACCACGACGGCAAGGTGGTGTTCGTGCGCGGCGCGCTGCCCGGCGAGCGCGTGCGCGCGACGCTGGTGCGCAGCAAGCCGCGCTTCGAGGTGGCACAGACCGTCGAGGTGCTGCGCGAGTCGCACGCGCGGGTGGTGCCGCGCTGCCCGCACTTCGGCGTGTGCGGCGGCTGCTCGATGCAGCACCTCGACGCCGACGCCCAGCTCGCGATCAAGCAGCGGGCGCTGGAAGACCAGCTGTGGCACATCGGCCGGCTGCGCCCGGGCATCGTCCTGCGGCCGCTGGCCGGCCCGCGCTGGGGGTACCGCTACCGCGCGCGGCTGTCGGTGCGCCACGTGCCGAAGAAGGGCGGCGTGCTGGTCGGGTTCCACGAGCGCGCCTCCAGCTACGTGGCCGACATGCACGAGTGCCACGTGCTGCCGCCGCGCGTCTCGGCGCTGCTGCTGCCGCTGCGCGATCTGGTTGGCGGCCTGGCCCTGCGCGAGCGCCTGCCGCAGATCGAGGTGGCGGTCGGGCAGATCCAGCGCGCGCCGGGGCCGTCGCCGGATGCACCCGGGCTGCCCGGGCACGCGCCGGGGCAGCCCGCGGGCGCACCCGACTCCGGCCTGTTGGTCGCGCTGGCGCTGCGCGTGCTCGATGCGCCCGGCGCCGCCGATCGCGCGCGGCTGCTCGAGTTCGCCGCGCGCGAGGGCGTCGAGCTGTGGCTGCAGCCGGCGGGGCCCGACAGCGTCACGCTGCTGTGCACGCGCGAAGGCAGGCCGGCGCGCAGCGACGACGATTCCGGGCTGGCCTATCGGCTACCCGAGTTCGACGTCACCATGCCGTTCCGGCCCACCGACTTCACCCAGGTCAACCACCGGATCAACGAGGTGCTGGTGTCGCGCGCGCTGCGGCTGCTCGATGCGCAGCCCGGCGAGCGGGTGGCCGATCTCTTCTGCGGGCTGGGCAACTTCACGCTGCCGCTGGCGCGGCGCGCCGGCGAGGTGATCGGCATCGAAGGCAACGCCGCGCTGGTGGCGCGCGCCCGGCGCAACGCCGCCTTCAACGGCCTGTCGGCGCGCACCGACTTCCGCACCGCCAACCTGTTCGAGGAAGGTGCCCCGCAGTGGCGCGCGCTCGGGCGCTTCGACCGGGTGCTGATCGACCCGCCGCGCGAGGGCGCGCTCGAGGTGGCCAGGGCGCTGGCGGACGATGCCGCGCCGCCGCGCCGCATCGTCTACGTGTCGTGCAATCCGGCGACGCTGGCGCGCGATGCGGCCATCCTCGTGCACCAGGGCGGCTACACGCTCGAGGCCGCGGGCGTGGTCGACATGTTCCCGCAGACCTCGCACGTGGAATCGATCGCGGTGTTCGGGCCGCGGTCCTGA
PROTEIN sequence
Length: 512
VNAPPSVAAGAAHVSAQGAGGAAGAPAAAARSGAPHGGPTLELEVASIDLEANGVAHHDGKVVFVRGALPGERVRATLVRSKPRFEVAQTVEVLRESHARVVPRCPHFGVCGGCSMQHLDADAQLAIKQRALEDQLWHIGRLRPGIVLRPLAGPRWGYRYRARLSVRHVPKKGGVLVGFHERASSYVADMHECHVLPPRVSALLLPLRDLVGGLALRERLPQIEVAVGQIQRAPGPSPDAPGLPGHAPGQPAGAPDSGLLVALALRVLDAPGAADRARLLEFAAREGVELWLQPAGPDSVTLLCTREGRPARSDDDSGLAYRLPEFDVTMPFRPTDFTQVNHRINEVLVSRALRLLDAQPGERVADLFCGLGNFTLPLARRAGEVIGIEGNAALVARARRNAAFNGLSARTDFRTANLFEEGAPQWRALGRFDRVLIDPPREGALEVARALADDAAPPRRIVYVSCNPATLARDAAILVHQGGYTLEAAGVVDMFPQTSHVESIAVFGPRS*