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SCN18_25_1_16_R1_B_scaffold_488_28

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 23840..24568

Top 3 Functional Annotations

Value Algorithm Source
rnhB; ribonuclease HII (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 232.0
  • Bit_score: 352
  • Evalue 5.30e-95
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 245.0
  • Bit_score: 352
  • Evalue 2.60e-94
Ribonuclease HII n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=RNH2_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 245.0
  • Bit_score: 352
  • Evalue 1.90e-94

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGATTCGAGCAACTCCTGCCATCAAGCCGAAGAAGAAGCCGGACGCCGCCGCGCCGACGTTCTCGCGCGAACGCGCGTTGATTAAGCGCGGGATCTGGCCGGTGGCGGGATGCGACGAGGCCGGCCGTGGGCCGCTGGCCGGACCGGTGGTGGCCGCCGCCGTGGTGCTCGACCCGAAGCGCATTCCCAAGGGGCTCGACGATTCCAAGCGGCTGACGGCCGCGCGGCGCGAGGAGCTGTTCGAGGAGATTTGCGCCACCGCCTCCTGTGCCGTGGCGTTCGCCTCGCCGGCGCGGATCGAGCGCGACAACATCCTGCGTGCCTCGCTGTGGGCCTTGGCGCGCGCGGTCCAGGCGTTGCCCGAGATGCCGCGGCACGTCTTTGTCGACGGTCGCGACCGCATCGATGCGCCCTGCGACTGCGATGCGGTGATCGGCGGGGACGAGTTGGTGCTGTCGATCGCGGCGGCCTCGATTATCGCCAAGGTGTCGCGCGATCGGTTGATGTGCCGGCTGGCGCAGGATTGTCCGGGCTATGGCTTCGAGGTTCACAAGGGGTATGGCGTGCCGGCGCATATGGAGGCGTTGCGCAGGCTCGGGCCGAGCGTTCATCATCGACGGCTTTTCGCGCCGGTGATGGCTGCGGCCGCGCGATTGCAGGTCACCGTCGAAGCGGATCGCATTGCCGTCGAACAGACGGTGATTTCGGTCGACGCCGCCGCCGGCTGA
PROTEIN sequence
Length: 243
MIRATPAIKPKKKPDAAAPTFSRERALIKRGIWPVAGCDEAGRGPLAGPVVAAAVVLDPKRIPKGLDDSKRLTAARREELFEEICATASCAVAFASPARIERDNILRASLWALARAVQALPEMPRHVFVDGRDRIDAPCDCDAVIGGDELVLSIAAASIIAKVSRDRLMCRLAQDCPGYGFEVHKGYGVPAHMEALRRLGPSVHHRRLFAPVMAAAARLQVTVEADRIAVEQTVISVDAAAG*