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SCN18_13_7_16_R1_B_scaffold_183_26

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 28569..29324

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSE9_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 252.0
  • Bit_score: 374
  • Evalue 6.20e-101
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 252.0
  • Bit_score: 374
  • Evalue 1.80e-101
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ACU03494.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 252.0
  • Bit_score: 374
  • Evalue 8.70e-101

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 756
ATGGACAATAACCTGGAATATAAAATCATTAAGCCCGGCAAACCGCTTTCGGACTTTGTAGAAAGCTTCTGGTTCTTACGCAATCATTCCGGCAGCGATAAAGAAACGACAGGATTGCCCGACGGGCTCATTGATGTATTGCTTTCCAAAGCAGCCGCAGCGCCTTTTCGTATCGTACAGCTTGGAGGATTGACGCAACACGAGCAGGCGACACTGCCCGCGGGCTGTGTAATATTTTGCATCAGCTTTAAATTGCTTGCCGTAGAATATATTTTTCGTGAACCTATTGCAAACATTCTTAACAGCGGGAAGCTTTTGCCTGATGATTTTTGGGATTTTAACGAAAATGACCTGGACAGCTTTGATCTTTTCTGCAAAAAAGCTTCACAGAAAATACAATCGCTTTTGCCCGAAGCAATTGACGAAAGAAAACGGAAACTTTTTGAACTGATCTACGCTGCCAGCGGAGCCATTACCGTAAAAGAGCTTTCCGAAAAAGTGTTCTGGAGCAGCCGGCAGATCAACCGTTATTTCAACCAGCAATTCGGCATTTCATTAAAGGCATATTGCAATATCCTTCGTTTTCGCGCCTCGCTGGAACATATCGCACAGGGAAAACTTTTTCCCGAAGAAAACTTTTCCGACCAAACGCACTTCATCAAAGAAGTTAAAAAGTTTGCCGGCGTGGCGCCGAAAGAATTATCCAAAAACAAAAACGACCGATTTATACTATTATCGGCAATAAAGCGGAAATAA
PROTEIN sequence
Length: 252
MDNNLEYKIIKPGKPLSDFVESFWFLRNHSGSDKETTGLPDGLIDVLLSKAAAAPFRIVQLGGLTQHEQATLPAGCVIFCISFKLLAVEYIFREPIANILNSGKLLPDDFWDFNENDLDSFDLFCKKASQKIQSLLPEAIDERKRKLFELIYAASGAITVKELSEKVFWSSRQINRYFNQQFGISLKAYCNILRFRASLEHIAQGKLFPEENFSDQTHFIKEVKKFAGVAPKELSKNKNDRFILLSAIKRK*