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SCN18_13_7_16_R1_B_scaffold_566_10

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(10974..12536)

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VMP4_CAUST similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 511.0
  • Bit_score: 589
  • Evalue 1.90e-165
glycine/betaine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 511.0
  • Bit_score: 589
  • Evalue 5.50e-166
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 511.0
  • Bit_score: 604
  • Evalue 1.10e-169

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGGGGGGAACGCGGGCCTCTTTCGCGGCCGCCCTGGCCAATCTGCCGGATTATCTGGGCCAGCATGTGCTGCTCAGCCTGTCGGCGCTTCTGCTCGGGCTCGCGATCAGCCTGCCGCTTGGCATTATCGCCGCCCGCTCGCGCGTGTTGCGCGGGCCGGTGCTGGGTTTTGCCAGCATGATCCAGACCATCCCGAGCCTCGCTCTGCTGGCCCTGTTCTATCCGGTACTGCTGGTTCTGTCGGTGTTCGCGCAATCGACCTTCGGGGCCGGTTTCCGCGCGCTGGGCTTTCTGCCCGCGCTGCTGGCGCTGACGCTCTATTCCATGCTGCCGGTGCTGCGGAACACGGTTTCGGCCATCACCGGCATCGACCCGGCGGTGATCATGGCGGCACGCGCCGTCGGCATGACCAAACGGCAAACCCTGTTTCTGGTCGAACTGCCGCTTGCCGCCCCCGTCATCATGGCCGGCATCCGCACCGCCGCGGTGTGGGTGATCGGCACCGCCACCCTGTCCACCCCCGTGGGCCAGACCAGCCTCGGCAATTACATCTTCACCGGCCTTCAGACCGAGAACTGGATTTTCGTTCTGTTCGGCTGTGTCGCGGCCGCCCTTCTGACCATGGTGGTGGATCGGCTTCTGGCACTGGCCGAACAGAGCTTCAGCGAACATTCCTTCGCCAAGCTGATTGCCTGTCTTGTCGGCCTCGCCCTCGTGGTGGGGGCAAGCCTTGCGCCCATGCTGGCCAGCGGGCGGGCCGATGTGGTGGTCGGGGTCAAGAATTTCAGCGAGCAGTATATTCTGGGCTCGCTGATCGAACGGCATTTGGCGGAAGCCGGTTTCAGCACGGTGCGGCGCGACAATCTCGGCTCCGCCGTGGTCTTCCGGGCGCTCACCGCGAACGACGTCAATGTCTATATCGATTATTCCGGCACCATCTGGACCAACGAGATGAAGCGCACCGGCAATCCCGGCCGCAAGGTGATGCTGCGCGAAATCCGCAAATGGCTGAAAGACAATTACGGCGTTGCCGATCTGGGCGCGGTGGGTTTTGAAAACGCCTACGCCTTCGCCATGCGGCGCGACCGGGCAGAGGCGCTTGGCATCCGCACCATTGCCGATCTGGCGGCGCACGCCTCCCAACTGAAACTCGGTACCGATTATGAATTTCCCAGCCGGCCGGAATGGCGCGCGGTGTCAAAGGCCTATCACTTCGATTTCGCGGTCAAGCGGCAGTACCAGCCGAATTTCATGTATCGCGCGGTTGAAACCGGCGATGTCGATGTGATTTCCGCCTTTTCCAGCGACGGGCGCATCGCGCAATACGATCTTGTGGTGCTGGGCGATCCCAAAGGCGCGCTGCCGCCTTACGATGCGATCATTCTGGTCTCGCCCTCCCAGGCCCATGATGAAAAACTTTTAAAGGCGCTGGAGCCCTTGGTCGGTGCGATCGATCTCGAAACCATGCAGAAGGCCAATCTGATGGTGGATCGCAGCACCAACAAGCGCACCCCGCGCGATGCCGCGATCTGGCTTGATCGTCAAATCAGTACCGGGCACTAA
PROTEIN sequence
Length: 521
MGGTRASFAAALANLPDYLGQHVLLSLSALLLGLAISLPLGIIAARSRVLRGPVLGFASMIQTIPSLALLALFYPVLLVLSVFAQSTFGAGFRALGFLPALLALTLYSMLPVLRNTVSAITGIDPAVIMAARAVGMTKRQTLFLVELPLAAPVIMAGIRTAAVWVIGTATLSTPVGQTSLGNYIFTGLQTENWIFVLFGCVAAALLTMVVDRLLALAEQSFSEHSFAKLIACLVGLALVVGASLAPMLASGRADVVVGVKNFSEQYILGSLIERHLAEAGFSTVRRDNLGSAVVFRALTANDVNVYIDYSGTIWTNEMKRTGNPGRKVMLREIRKWLKDNYGVADLGAVGFENAYAFAMRRDRAEALGIRTIADLAAHASQLKLGTDYEFPSRPEWRAVSKAYHFDFAVKRQYQPNFMYRAVETGDVDVISAFSSDGRIAQYDLVVLGDPKGALPPYDAIILVSPSQAHDEKLLKALEPLVGAIDLETMQKANLMVDRSTNKRTPRDAAIWLDRQISTGH*