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SCN18_13_7_16_R1_B_scaffold_752_20

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(19251..20534)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 421.0
  • Bit_score: 723
  • Evalue 1.70e-205
Transcription termination factor Rho n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AKE2_MARMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 423.0
  • Bit_score: 719
  • Evalue 1.00e-204
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 421.0
  • Bit_score: 723
  • Evalue 3.40e-206

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGACTGTGCAATCCGGCCTGCAAGCGATGAAGCTGCAGGATCTCAAAGCGAAATCCCCCACCGATCTGCTCGCCTTCGCCGAAGAGCTGGAGATCGAGAACGCATCGTCCATGCGCAAGCAGGACATGATGTTCGCGATCCTGAAAGAACTCGCCGAGCGCGATGTGGAGATCACCGGCGGTGGCACGCTGGAGGTGCTGCAGGACGGTTTCGGCTTCCTGCGCAGCCCGGAATCGAATTACCTCGCCGGGCCGGACGACATCTATGTGTCGCCGTCACAGATCCGCCGCTTCGGCCTTCGCACCGGCGATACCGTGGATGGCCCGATCCGCAGCCCGAAGGACGGCGAACGCTATTTCGCGCTGCTGAAGGTCTCCACCATCAATTTCGAAGACCCCGAAGCCACCCGCCACAAGGTGCATTTCGACAATCTGACGCCGCTTTACCCGACCAAGCGGCTGAACATGGAAATCGAAGACCCCACCATCAAGGACCGCACCGGCCGGGTGATCGATATCGTGGCGCCGCAGGGCATGGGCCAGCGCGCGCTGATCACCGCCCCGCCCCGCACCGGCAAGACCGTGATCCTGCAGAACATCGCCAAGGCGATCGCGGCCAATCACCCCGAATGCTATCTGATCGTGCTGCTGATCGACGAACGGCCGGAAGAAGTCACCGACATGCAGCGCACGGTGAAGGGCGAGGTGATTTCGTCGACCTTCGACGAACCGGCCTCCCGCCACGTACAGGTCGCCGAGATGGTGATCGAGAAGGCGAAGCGCCTGGTCGAACACAAACGCGACGTGATCATCCTGCTCGATTCCATCACCCGTCTGGGCCGCGCCTACAACACGGTTGTCCCCTCCTCCGGCAAGGTGCTGACCGGCGGTGTCGATGCCAATGCGCTGCAGCGGCCGAAGCGTTTCTTCGGTGCGGCCCGCAATATCGAGGAAGGCGGCTCGCTCACCATCATCGCAACCGCCTTGATCGATACCGGCAGCCGCATGGACGAAGTGATCTTTGAAGAGTTCAAGGGTACCGGCAATTCGGAAATCATTCTGGACCGCAAGGTGGCGGACAAGCGCATCTTCCCGGCCATCGACATCCTGAAATCCGGCACCCGCAAGGACGAGTTGCTGGTGGACAAGGCCACCCTGTCGAAGATGTATGTGCTGCGCCGCATCCTGGCGCCGATGGGCACGGTGGACGCGATCGAGTTCCTGCTCGACAAGCTGCGTTCGGCCAAGAACAACGCCGATTTCTTCGACAGCATGAATACGTGA
PROTEIN sequence
Length: 428
MTVQSGLQAMKLQDLKAKSPTDLLAFAEELEIENASSMRKQDMMFAILKELAERDVEITGGGTLEVLQDGFGFLRSPESNYLAGPDDIYVSPSQIRRFGLRTGDTVDGPIRSPKDGERYFALLKVSTINFEDPEATRHKVHFDNLTPLYPTKRLNMEIEDPTIKDRTGRVIDIVAPQGMGQRALITAPPRTGKTVILQNIAKAIAANHPECYLIVLLIDERPEEVTDMQRTVKGEVISSTFDEPASRHVQVAEMVIEKAKRLVEHKRDVIILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKVADKRIFPAIDILKSGTRKDELLVDKATLSKMYVLRRILAPMGTVDAIEFLLDKLRSAKNNADFFDSMNT*