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SCN18_10_11_15_R5_P_scaffold_67_151

Organism: SCN18_10_11_15_R5_P_Alphaproteobacteria_68_131

near complete RP 47 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(162618..163421)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate 5-dehydrogenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DK30_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 266.0
  • Bit_score: 299
  • Evalue 2.10e-78
Shikimate dehydrogenase {ECO:0000313|EMBL:KGT76395.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 266.0
  • Bit_score: 301
  • Evalue 1.00e-78
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 266.0
  • Bit_score: 299
  • Evalue 5.90e-79

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGCTGGAAGGTCTGAGCGGCGCCACGCGCGTTTATTTCATTGTCGGCCACCCCATCGCCCAGGTGAAGGCGCCGGCCGGCATGAGCCGGATGTTCGCCGAGCGCGGGCGCGATGCGATCTGCGTGCCGCTGGATGTAGCGTCAGCTGATTTCGACGATTTCCTCGCGGTCGCGGCCGCTGCGCGCAATGTCGACGGCCTCGTCATCACCGTCCCGCACAAGTTTGCCGCGACGTGCGGCTGCGCCACCGTGTCGGCGCGGACCGAACTGCTGAGGTCCTGCAACATCATGCGTCGCAACCGGGACCGCAGCTGGCATGGCGACATGCTGGACGGCCTAGGCAGTGTCGGGGCGATGCGGGCGAAGGGCGGCAGAATCGAGGGCTGCCGGGCTTTGCTGGTGGGGGCGGGCGGGGCGGGCAGCGCGATCGGCCTGGCGCTGCTCGACGCCGGGGTCGCGACCCTGGCCGTGCACGACATGGATGCAGGCCGGCGCGACGCGCTGATCGCACGCCTCGCTTCGCGCCACGGGACCAAAGTTTCGGCGGGATCAGCCGATCCCGCCGGCTTCGACATCGTCTCGAACGCGACGCCGACCGGCATGGGCCCGGGCGATCCGCTGCCGGTCGATGTCGAACGGCTGGAGCGGCATGCCTTCGTCGCCGACGCGATCACCGTACCGGAGATCACACCGCTGCTGCAGGCCGCGCGGGGCTTGGGTTGCGCGATCTCGACCGGCGTCGACATGTTCGAGGCGGAACGTGGCGCGATGTTCGATTTCTGGTTTCCGGCGGACGCCGCATGA
PROTEIN sequence
Length: 268
MLEGLSGATRVYFIVGHPIAQVKAPAGMSRMFAERGRDAICVPLDVASADFDDFLAVAAAARNVDGLVITVPHKFAATCGCATVSARTELLRSCNIMRRNRDRSWHGDMLDGLGSVGAMRAKGGRIEGCRALLVGAGGAGSAIGLALLDAGVATLAVHDMDAGRRDALIARLASRHGTKVSAGSADPAGFDIVSNATPTGMGPGDPLPVDVERLERHAFVADAITVPEITPLLQAARGLGCAISTGVDMFEAERGAMFDFWFPADAA*