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SCN18_10_11_15_R4_P_scaffold_649_5

Organism: SCN18_10_11_15_R4_P_Reyranella_68_349

near complete RP 40 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1681..2376

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL1_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 233.0
  • Bit_score: 354
  • Evalue 8.00e-95
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 233.0
  • Bit_score: 354
  • Evalue 2.30e-95
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 233.0
  • Bit_score: 354
  • Evalue 1.10e-94

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCCCAGGGTAAGCGCTACACGACCGCCAGCCAGACGGTCGACCGTGAGAAGACCTACTCGCTCGACGAGGCGGTCAAGATCGTCAAGGCGAACGCCAAGGCGAAGTTCGACGAGACCATCGAGGTCGCGATGAACCTCGGCATCGACCCGCGCCACGCCGACCAGGCGGTGCGCGGCATGGTCGAGCTGCCGAGCGGCACCGGCAAGACGGTGCGCGTCGCGGTGTTCGCCCGCGGCGCCAAGGCCGAGGAGGCCAAGGCCGCCGGCGCCGACCTGGTCGGTGCGGAGGACCTCGCCGAGAAGATCAACGGCGGCGAGATGAATTTCGACCGCTGCGTCGCCACGCCCGACATGATGGGCGTCGTCGGCCGCCTCGGTAAGGTTCTGGGCCCGCGCGGTCTGATGCCGAACCCGAAGCTCGGCACCGTGACGCAGGACGTGACCGCCGCGGTGAAGGCCGCCAAGGCCGGCTCGATCGAGTTCCGCGCCGAGAAGGCCGGCATCGTTCATGCTGGCGTCGGCAAGGCGTCGTTCTCGGAAGAGGCGATCGCGGCCAACGTCAAGGCGCTGGTGACCGCGATCAATCGCGCGAAGCCGTCGGGCGCCAAGGGCACCTTCATCAAGAAGGTGTCGATCAGTTCGACCATGGGACCGGGCGTGAAGCTCGATCCCGCCACCGCGCTCAACGTCTGA
PROTEIN sequence
Length: 232
MAQGKRYTTASQTVDREKTYSLDEAVKIVKANAKAKFDETIEVAMNLGIDPRHADQAVRGMVELPSGTGKTVRVAVFARGAKAEEAKAAGADLVGAEDLAEKINGGEMNFDRCVATPDMMGVVGRLGKVLGPRGLMPNPKLGTVTQDVTAAVKAAKAGSIEFRAEKAGIVHAGVGKASFSEEAIAANVKALVTAINRAKPSGAKGTFIKKVSISSTMGPGVKLDPATALNV*