ggKbase home page

SCN18_30_10_14_R3_B_scaffold_794_13

Organism: SCN18_30_10_14_R3_B_SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34_56_13

near complete RP 45 / 55 MC: 2 BSCG 47 / 51 ASCG 13 / 38
Location: comp(10824..11414)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 196.0
  • Bit_score: 256
  • Evalue 1.60e-65
isopropylmalate isomerase n=1 Tax=Bacillus anthracis RepID=UPI0001B41811 similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 199.0
  • Bit_score: 163
  • Evalue 1.30e-37
3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 196.0
  • Bit_score: 256
  • Evalue 3.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → Bacteria

Sequences

DNA sequence
Length: 591
ATGGAAGGCTTTACGATTCATCGCGGCACGACTGCGGTGTTACCGGACGATAACGTCGATACGGACCGCATTATTCCCGCGCGGTTCCTTTCGCGAGTGAGTCGGTCTGGGTATGGCGAACTTCTCTTTTCGGATGTTCGTGGCGAAGGCTTTCCGCTCGACCAGCCGGCGGCCCAGGGGGCAACGGTTTTGGTGGTGGGAACCAACTTTGGCTGCGGGTCCTCTCGCGAGCATGCGGTGTGGGCGATTCAACAGGCAGGATTTAAGGCGGTGGTGGCCAAGCGCACGGAGACGAGCGCGGCCTATAGCGATATCTTCCGGCAGAATGCGGCGAATTGCGGGTTGCTCCTGGTGGAGCTGACGGAGGAAGATCACGACAAGATTTCTTGGCGAGGTTCCGGAGTCGAGATTGAGATCGATTTGCCGAGCCAGCTGGTTCGGCAGCAGGGTGAGGAGTCTCACTTCGATATCAGCCCGGTGAGTAAGGAAGCTATCCTGAAGGGACTGGACCTGATCGGGACGACACTTATCCACGAGAAGGAAATCGGCGAGTACGAGTCGAAATCCATCGCTTACGTTCCGCAGAGATAA
PROTEIN sequence
Length: 197
MEGFTIHRGTTAVLPDDNVDTDRIIPARFLSRVSRSGYGELLFSDVRGEGFPLDQPAAQGATVLVVGTNFGCGSSREHAVWAIQQAGFKAVVAKRTETSAAYSDIFRQNAANCGLLLVELTEEDHDKISWRGSGVEIEIDLPSQLVRQQGEESHFDISPVSKEAILKGLDLIGTTLIHEKEIGEYESKSIAYVPQR*