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SCN18_26_2_15_R1_B_scaffold_382_24

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 27039..27686

Top 3 Functional Annotations

Value Algorithm Source
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=3 Tax=Ochrobactrum intermedium RepID=C4WPQ8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 214.0
  • Bit_score: 365
  • Evalue 1.90e-98
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:ELT46590.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 214.0
  • Bit_score: 365
  • Evalue 2.70e-98
polar amino acid ABC transporter inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 215.0
  • Bit_score: 343
  • Evalue 2.80e-92

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGTTTTCGATCTCCACCTTCCTGAGCAGCTTCGAGCCGCTCCTCTGGGCCGCGCGCTACACGCTTTTGATTTCCGGGCTGGGCATTGCGCTCGGGCTGGTCGTCGGGGCGATGATCTGCGCGGCCGCGCTGTCGCGCACGGTATGGCTGCGCCGGTTCGCGGCGCTCTGGGTCAGCTTCCTGCGCGGCGTTCCGCTGCTGGTCCAGCTTCTCCTGTGCTACTATCTCCTGCCGGTCATCGGCATCAACGTGCCGGCGCTGGTCGCCGCCGTGGTGACGGTCGGCATCTGCTCCAGCGCCTATGTCTCGGAAATCTGGCGCGGCGCCATCATCGCGCTGCCGAGAGGGCAGACCGAGGCGGCGACCGCCATCGGCATGCGGCCGAGCGACATCTGGATCCGGATAATCCTGCCGCAGGCGTTCCGCTATTCGCTGCCGGCGCTGGTCAATGAGCTGATCCTGCTGGTCAAGGCATCGTCGCTGGTCTCGCTCGTCGGCATTATGGAGGTGACGCGCGCCAGCCAGGCGCAGGCGGCCACCACCTTCCGCCCGCTGGAAGTCTATATCGCGGCGGCCTGCATCTATCTGGTCATCAATCTCTGCTTCGCCGCGCTCGGCCGCTATCTCGAACACAGGACGGCCTTGTGA
PROTEIN sequence
Length: 216
MFSISTFLSSFEPLLWAARYTLLISGLGIALGLVVGAMICAAALSRTVWLRRFAALWVSFLRGVPLLVQLLLCYYLLPVIGINVPALVAAVVTVGICSSAYVSEIWRGAIIALPRGQTEAATAIGMRPSDIWIRIILPQAFRYSLPALVNELILLVKASSLVSLVGIMEVTRASQAQAATTFRPLEVYIAAACIYLVINLCFAALGRYLEHRTAL*