ggKbase home page

SCN18_26_2_15_R1_B_scaffold_890_24

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(23900..24886)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 325.0
  • Bit_score: 585
  • Evalue 4.20e-164
Pseudouridine synthase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8G2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 325.0
  • Bit_score: 583
  • Evalue 6.70e-164
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 325.0
  • Bit_score: 577
  • Evalue 1.40e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGGCAGGAATAGAGCAGATAAAAGTGGAGGAGGGTGAGGCCGGCATGCGCCTCGACCGCTGGTTCAAGGCCCATTTCCCGGGGCTGGGCTTCGGGCATCTCCAGAAACTCCTCAGGTCCGGCCAGATCCGCGTGGACGGCGGCAGAGTGAAATCGGACACGCGCATGGAGCCGGGGCAGGTGGTGCGCGTTCCGCCGCTCGGCGTCGACCGCAAGGGCGGCGGCGATCTCACCGTCAATACGATCAAGGGAAGCGGCGACGGCGAACTTCTGGCGAAGATGCTGCTGCACGAGGATCCGAAGGTTTTCGTCTTCAACAAGCCTTCCGGCCTGGCGGTGCAGGGCGGTTCGGGCGTGACGCGCAGCGTCGACGGCATGCTGGAGGCCTGGCGCAACAAGAAGGGCGAGAAGCCGCGGCTGGTGCATCGGCTCGACCGCGACACGTCCGGCGTGCTGGTCGTGGCGCGCACGCGGCTCGCCGCGATGAAGCTTGCCGAGGCGTTTCGCGCGCGCGAGACGAAGAAGACCTATTGGTCCCTCGTGAAGGGCGTGCCGAAGAAGCGGCAGGACAAGATATCGACCTGGCTGGTGAAGGAACCGACCGCGGACGGCGACCGCATGCGCGTGGCGAAGCACGGGGAAGAAGGCGCCGACCACGCCGTCTCCTTCTATCGCGTCGTGGAGCAGGCGGGCCAGAGCCTCGCCTGGCTGGAGATGGAGCCCTATACGGGACGCACCCATCAGTTGCGCGTCCATGCCGCCCATATCGGCCATCCGATCATCGGCGACCCCAAATATTTCGAGGCGGATATCAACTGGGAATTTCCGGGCGGCATCCAGAACCGGCTGCACCTGCATGCCCGGCGGATCGTCATTCCGCATCCCGACGGCGGCGTGGTCGATGTCGTCGCGCCGCTGCCGCCGCATATGCGCCAGAGCTGGAACCTGCTCGGCTTCGACGAGGCGGCAGCGGAGCCCGTGGCGTGA
PROTEIN sequence
Length: 329
MAGIEQIKVEEGEAGMRLDRWFKAHFPGLGFGHLQKLLRSGQIRVDGGRVKSDTRMEPGQVVRVPPLGVDRKGGGDLTVNTIKGSGDGELLAKMLLHEDPKVFVFNKPSGLAVQGGSGVTRSVDGMLEAWRNKKGEKPRLVHRLDRDTSGVLVVARTRLAAMKLAEAFRARETKKTYWSLVKGVPKKRQDKISTWLVKEPTADGDRMRVAKHGEEGADHAVSFYRVVEQAGQSLAWLEMEPYTGRTHQLRVHAAHIGHPIIGDPKYFEADINWEFPGGIQNRLHLHARRIVIPHPDGGVVDVVAPLPPHMRQSWNLLGFDEAAAEPVA*