ggKbase home page

SCN18_26_2_15_R1_B_scaffold_9598_3

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2966..3394)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 139.0
  • Bit_score: 203
  • Evalue 1.50e-49
UPI0003CF5FE9 related cluster n=1 Tax=unknown RepID=UPI0003CF5FE9 similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 139.0
  • Bit_score: 203
  • Evalue 1.10e-49
ribonuclease D similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 139.0
  • Bit_score: 201
  • Evalue 8.80e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATCGCGCAGCAGCAGCCGCGCGACCAGGCCGCGCTCGCGAAGCTGCGGACGATCCCGAAGGGCTGGGAGCGCTCCTCGCTTGCCGCCTCGCTGCTCGACGCCGTCAACGCCGCGCTCGCGCTGCCGAAGGAGGACTTGCCGAAGCTTTCCCGGCAGGCGCATGCGCCCGAGGGATCGAGCGCTGCCAGCGAGCTCCTCAAGGTGTTGCTGAGGATCGTCTCGGAGCAGAGCAACGTCGCGCCGAAGATGCTGGCCTCCGGCGACGACCTCGACCGCATCGCCGCCGACGGCGAGAACGCCGACGTGCCCGCCATGCATGGCTGGCGGCGCGACGTGTTCGGGGACAAGGCGCTGAAGCTCATCCGCGGCGAGATGGGCGTGAAGTTCGAGAAGCGCCGTATCCGCGTCTTCGACCTGCCCGACGGCTGA
PROTEIN sequence
Length: 143
IAQQQPRDQAALAKLRTIPKGWERSSLAASLLDAVNAALALPKEDLPKLSRQAHAPEGSSAASELLKVLLRIVSEQSNVAPKMLASGDDLDRIAADGENADVPAMHGWRRDVFGDKALKLIRGEMGVKFEKRRIRVFDLPDG*