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SCN18_26_2_15_R1_B_scaffold_6975_1

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1366..1980)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulatory protein, LacI family n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZCL7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 194.0
  • Bit_score: 149
  • Evalue 2.60e-33
putative transcriptional regulatory protein, LacI family similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 194.0
  • Bit_score: 149
  • Evalue 7.50e-34
Putative transcriptional regulatory protein, LacI family {ECO:0000313|EMBL:BAM91221.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 194.0
  • Bit_score: 149
  • Evalue 3.70e-33

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGGTCACATTGCTGTCCGACGTCCAGAATTGCGCCCGGCAGGCCTATGTCGGCATGGACAATTTCGCGGCAGGACGAACGGCCGGCGCGCTGCTCGGATGGTTCGTGGGCAGGCGGGATGCGCAACTCTGCATATTCGGCGGTTCCGAGCTCTACCAGGAGCTCGCGCTGCGGGTTGCCGGATGCGGAGAGGTCCTTGCCGCGCGGTTTCCCTCGACCCGGCTGCTGCCGGTCCAGTGGAATGTTGAACATGCCGGCCCCGCCAGGGAAGCGGCCAGGAACCTGCTGGCGACGCATCGCGATCTGTCGGCCATCTATGTCGCGGGCGGCGGATTGTTCGGCGTGGCGGAAGCGCTGGCCGAGGCCGGTCGAGCCGGCTCGACCATCCTCATCGGCCACGACATGGCGGGCGGCATGCGGGAACTCCTTCGCAACGGCACGGTGAACGCCGTCATCTGTCAGAACCCGTATCAGCAGGTCCGGCGCGGGATTCGCCTTGCGGCGCTGCATGCCTCGGGCACGGCGGTAACCGAGCCGCCAGCCTTCGCGGAGATCGAGATCGTCATCGACGAGAGTGCGCCGGAGAGTTTCGGCAGGAATCCACTCGACTATTGA
PROTEIN sequence
Length: 205
VVTLLSDVQNCARQAYVGMDNFAAGRTAGALLGWFVGRRDAQLCIFGGSELYQELALRVAGCGEVLAARFPSTRLLPVQWNVEHAGPAREAARNLLATHRDLSAIYVAGGGLFGVAEALAEAGRAGSTILIGHDMAGGMRELLRNGTVNAVICQNPYQQVRRGIRLAALHASGTAVTEPPAFAEIEIVIDESAPESFGRNPLDY*