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SCN18_30_10_14_R2_B_scaffold_2608

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2608_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(87..1349)
DNA (1263bp) protein (421aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
glgC; ADP-glucose pyrophosphorylase (EC:2.7.7.27)
glucose-1-phosphate adenylyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B7A
SCN18_30_10_14_R2_B_scaffold_2608_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1383..2480)
DNA (1098bp) protein (366aa)
glycosyl transferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4213
glycosyl transferase family protein
Tax=RBG_16_Planctomycetes_64_10_curated
SCN18_30_10_14_R2_B_scaffold_2608_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2477..2998)
DNA (522bp) protein (174aa)
hypoxanthine phosphoribosyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5117
hypoxanthine phosphoribosyltransferase
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:AGA24768.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2608_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3132..3689
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E5479E
Putative exonuclease {ECO:0000313|EMBL:EGJ33153.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
exonuclease
SCN18_30_10_14_R2_B_scaffold_2608_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3693..4103
DNA (411bp) protein (137aa)
SCN18_30_10_14_R2_B_scaffold_2608_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4167..5450)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D877AA
Tax=CG_Arma_02
SCN18_30_10_14_R2_B_scaffold_2608_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6473..8278)
DNA (1806bp) protein (602aa)
Transcription termination factor Rho n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z8G5_STRSW
rho; hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2608_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8901..9206
DNA (306bp) protein (102aa)
WD-40 repeat n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5912
SCN18_30_10_14_R2_B_scaffold_2608_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9219..9536
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5911
Tax=RBG_13_Planctomycetes_50_24_curated
SCN18_30_10_14_R2_B_scaffold_2608_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9561..10463
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5910
FG-GAP repeat-containing protein
Tax=RBG_13_Planctomycetes_62_9_curated
SCN18_30_10_14_R2_B_scaffold_2608_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10474..11676
DNA (1203bp) protein (401aa)
WD-40 repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C590F
NTPase-like protein
Uncharacterized protein {ECO:0000313|EMBL:KFY03084.1}; TaxID=1391699 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.;" source="Pseudogymnoascus pannorum VKM F-3808.;"
SCN18_30_10_14_R2_B_scaffold_2608_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11787..14522)
DNA (2736bp) protein (912aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41AC
Thioredoxin H-type {ECO:0000313|EMBL:EMI16178.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
SCN18_30_10_14_R2_B_scaffold_2608_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14519..15445)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41AC
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sigma-70 family RNA polymerase sigma factor
SCN18_30_10_14_R2_B_scaffold_2608_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15784..16572)
DNA (789bp) protein (263aa)
SCN18_30_10_14_R2_B_scaffold_2608_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16829..17425
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CHR2_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI68745.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCN18_30_10_14_R2_B_scaffold_2608_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17774..18361)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LT62_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFK98493.1}; TaxID=1524467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. Ag1.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2608_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18491..18829)
DNA (339bp) protein (113aa)
Membrane protein of uknown function UCP014873 n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SW54_PLAL2
membrane protein
Membrane protein of uknown function UCP014873 {ECO:0000313|EMBL:ADG67339.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2608_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19706..19954
DNA (249bp) protein (83aa)
SCN18_30_10_14_R2_B_scaffold_2608_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20186..20833)
DNA (648bp) protein (216aa)
Transposase n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XQ14_9ACTO
Transposase {ECO:0000313|EMBL:EFL40468.1}; TaxID=467200 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
transposase IS4 family protein
Displaying 19 items

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