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SCN18_30_10_14_R2_B_scaffold_1216_6

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(13227..14480)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38E8 similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 313.0
  • Bit_score: 251
  • Evalue 1.00e-63
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 345.0
  • Bit_score: 210
  • Evalue 7.30e-52
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28748.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 345.0
  • Bit_score: 210
  • Evalue 3.60e-51

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Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1254
ATGCCGACCAGCCCGCTGACCGACTTCATCCGGCACCTGGGCGGCGCGCCGCCGGCCGGGGCCGACCTGACCGACGACGAGCTCCTGGCGGGCGTCGTGGACCGCCGCGACCCGGCGGCGCTGGAGGCGCTCGTCTACCGCCACGCCCCGATGGTGTGGGGCGTGTGCCGGCGCGTGCTGCGCGACGACCACGACGCCGCGGACGCCTTCCAGGCCACGTTCCTCGTCCTCGTCCGCCGCGCCGCGACGGTCCGCACGACAGCCGGGAACTGGCTGTACGGCGTCGCCCGTCAGACCGCTCTCAAGGCCCGCGCGACCCGGGCGAAGCGGGCGGCGCGGGAGCGGTCGGTGCCGGACCTGCCCGACGTTCCCGCCCCCGGGCGCGGCGCCGACGCCGACCTGGGGCTCGTGCTCGACCGTGAGCTGAGCCGGCTGCCGGAAAAGTACCGCACGGTCCTCGTGCTGTGCGACCTGGAAAGCCGGAGCGGCCGCGAGGCGGCACGGGAGCTGGGGTGCCCGGAGGGGACGGTGGCGAGCCGACTTTCCCGGGCGCGGGCGCTGCTCGCCAGGCGTCTCACCCGGTGCGGGTACGGGGCGGCCGCCGGCGCGGTCGCGTGGTCGGCGGGCGTGCCGGCCGGGGTGATGAGTTCCACGATCCGAATCGCGGCCGGGCGCGGGGCGGTTTCGCCCGCGGTCGCCGCGCTCACGACAGGAGTGGTCCGGGCCATGTCACGAAGCACGCTCAAGACGGCCCTGGTGGCACTGACGGCGGCGGTGTGCGCCGGCGCCGGCGGGTGGGCGGACCGCACGCGGGCGGCGGGTCAGCCGCCGGCCGCGGCGCCGCAGGTCGTCCCGGCGGAGCCGGCCGCCGCGCGAAAGGCCGTCGTGCCGGAGCGGTCGTTCGCGGAGGGGGTCCTGGACGTCAACGGCGGGAACCCCGAGGGGATGATGTTCGCCGAGCAGGCGACGACGAAGGTGGACGCGGAGGCGCCGCGCAGCTTCAACCTGATCGTCACGTCGGCGCGGAACGCGAAGGGCGAACGCGAGGACGTGATCGTCCGCCGCGGGACGATGCGCGTCTTCCGGGCCGACACCGGCGTGGACGACTTCACCGCGAAGGGCGGGTGGTACTGGCGGTGCGGCGCGACCGAGGGGCGGACGGAGTTCAAACACCCGGGCGCGTTGATCATGGTCGTGTACGAGCACGACGGCACGGTCCGCTGGTACTCGCTCGCGCCCGACCTCCGCTGCTGA
PROTEIN sequence
Length: 418
MPTSPLTDFIRHLGGAPPAGADLTDDELLAGVVDRRDPAALEALVYRHAPMVWGVCRRVLRDDHDAADAFQATFLVLVRRAATVRTTAGNWLYGVARQTALKARATRAKRAARERSVPDLPDVPAPGRGADADLGLVLDRELSRLPEKYRTVLVLCDLESRSGREAARELGCPEGTVASRLSRARALLARRLTRCGYGAAAGAVAWSAGVPAGVMSSTIRIAAGRGAVSPAVAALTTGVVRAMSRSTLKTALVALTAAVCAGAGGWADRTRAAGQPPAAAPQVVPAEPAAARKAVVPERSFAEGVLDVNGGNPEGMMFAEQATTKVDAEAPRSFNLIVTSARNAKGEREDVIVRRGTMRVFRADTGVDDFTAKGGWYWRCGATEGRTEFKHPGALIMVVYEHDGTVRWYSLAPDLRC*