ggKbase home page

SCN18_30_10_14_R2_B_scaffold_1583_17

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(19297..19680)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C404A similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 122.0
  • Bit_score: 191
  • Evalue 4.90e-46
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 117.0
  • Bit_score: 131
  • Evalue 1.70e-28
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 117.0
  • Bit_score: 131
  • Evalue 8.50e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGTTCGCGCTCGCAGTAAAGCCACCACGTCGCGCCGCAAGAAGCGCACGAGGAAGCTCACGAAGGGGTTCCGCCTCGCCCGCCACAACCTGTACCGGCAGGCGATCGTCACGCTCATCCGCGCCCGGGCGTTCGCCTACCGCGACCGCAAGGTCAAGAAGCGAGACTTCCGCCGGCTGTGGATCATCCGCATCAACGCCGCCTGCCGGATGCGCGGGATGCGCTACAGCGAGTTCATCCACGGACTCCAACTGGCGATGGTCGCGCTCGACCGCAAGTCGCTGTCCGAGATCGCCATCCACGACCCGGCGGCGTTCGACCAGCTCGTCGCCATCGCCCGCGAGAAGCTGCCGAAGCCGCAGCCGGCCGCCGCGAAGGCGTGA
PROTEIN sequence
Length: 128
MVRARSKATTSRRKKRTRKLTKGFRLARHNLYRQAIVTLIRARAFAYRDRKVKKRDFRRLWIIRINAACRMRGMRYSEFIHGLQLAMVALDRKSLSEIAIHDPAAFDQLVAIAREKLPKPQPAAAKA*