ggKbase home page

SCN18_30_10_14_R2_B_scaffold_1601_9

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(12002..12826)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD86_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 260.0
  • Bit_score: 278
  • Evalue 5.10e-72
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEF62032.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 260.0
  • Bit_score: 278
  • Evalue 7.10e-72
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 271.0
  • Bit_score: 263
  • Evalue 4.80e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGTTCTTGCGTACCCACACACCCGGCCCGCCGCTGGACGAGTACGTCGACCGCTTCTGGTTGTGTTCGGACACGCCGCAGCATCCCCGGGAACGGATTCTGCCGAGCGGGACGGTCGAACTGGTGATCAACCTCAGCGACGATGAGATCCGGATTTACGACTCATCGCACCCCGACCGTTGTCGGCGGTATTCGGGAGCCGTTGTCTCGGGGCCGTACCGCAGCTTCATCGTGATCGACCCGCTCCAGCACGCCTCCATCATCGGCGTGCACTTCCGGCCGGGCCGCGCGGTCCCCGTCCTCGGCCTACCGGCGAGCGAGGTCACCGACGCGCACGTCGATCTCGAAACCCTCTGGGGGCCAACGGCCGCCGAACTCCGCGAACGGCTGTGCGCGGCCGCCACGCCGGCGGAGCGATTCGCCGTGCTGGAAGACGTGCTCCTCGGGCGCCTGTGCCGGGCACGGCCGCGGCACGGCGCCATCCCGGTCGCGCTCGACGCCCTTGAGCGAGCCGACGCGGTCGTGACGGTCCGCGACCTCGCCCGGCGGGTCGGCCTCAGCCAGCGGCGGTTCATCCAGCTTTTCACGGCCGAGGTCGGCCTGACGCCGAAGCTGTACGGCCGCGTGCGCCGGTTCCAGCGGGCGCGGGAGTTGGTGCGGATGGCCACGGAACCGGACTGGGCGGCGGTCGCCGTGGCCTGCGGGTTTTTCGACCAGTCGCACCTGATCCGCGACTTCGGGGAGTTCTCCGGCCTCAGCCCCGTGGCTTACATGAACCAGCGGAGCAAACACGTGCTACTCAACCACGTGCCGTGGGTCGGGTAG
PROTEIN sequence
Length: 275
MFLRTHTPGPPLDEYVDRFWLCSDTPQHPRERILPSGTVELVINLSDDEIRIYDSSHPDRCRRYSGAVVSGPYRSFIVIDPLQHASIIGVHFRPGRAVPVLGLPASEVTDAHVDLETLWGPTAAELRERLCAAATPAERFAVLEDVLLGRLCRARPRHGAIPVALDALERADAVVTVRDLARRVGLSQRRFIQLFTAEVGLTPKLYGRVRRFQRARELVRMATEPDWAAVAVACGFFDQSHLIRDFGEFSGLSPVAYMNQRSKHVLLNHVPWVG*