ggKbase home page

SCN18_30_10_14_R2_B_scaffold_1334_15

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 20152..21150

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial n=1 Tax=Zavarzinella formosa RepID=UPI00036196F2 similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 335.0
  • Bit_score: 203
  • Evalue 2.50e-49
prepilin-type N-terminal cleavage/methylation domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 340.0
  • Bit_score: 164
  • Evalue 3.70e-38
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA25454.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 340.0
  • Bit_score: 164
  • Evalue 1.80e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGCCTCGGAGTACCGCGCCGCACGCCTGGCGGGGTTTCACGCTGATCGAGTTGTTGGTCGTCATCGCCATCATCGCCATCCTGATCGGGCTGCTCCTCCCCGCCGTCCAGAAGGTCCGCGAGGCCGCCGCCCGGTCGAAGTGCCAGAACAACCTCAAGCAGATGGCCTTGGCCCTCCACAACGCCAACGACACCAACAACCGGCTCCCGCCGATGGCCGGGACGTACGGCGGCGCCTACTACGCCCCCCTGCTGTTCCACCTCCTCCCGGGCATCGAGCAGGGGAACGTCTACAACATGGCCACCATCAGCGGGTACATCATCCCGATGTGGCAGACCCCGGGGCCGACCGCCGGGTCGTTCCTCCGCCAGACCGCGATCCCGACGTACAAGTGCCCGTCGGACCCGACCCTGGGGGTCAACCCGGCGACCGACTGGCTGCCGGGGGACGCGTCCTACGCCGGCAACTTCCAGGTGTTCGGCAACCGGGCTAACCCGACCAGCAGCGCCCCGGCCGACTGGGACGGGCGGGCGAACCTGACGGCGACCCTCACCGACGGGACCTCGAACACGGTGGTGTTCGCCGAGAAGTTGGCCGTGTGCGCCGGGAGCAAGGGGGCCGGGAACGGGGCGAGTGACGTCGGCGGGACGTGGTGGATGCGGGGGGTGTACAACGCCAGCACGTTCAGCGGGTCCGCCCCGGGGACGAACGACAGCTTCCCGGGGGACCGGTTGTCGGCCGTGTTCGGGGGCGGGAAGGGGAGCGACGGCACCCTGTGGTACACGGGGGTCGCGGCCATGTTCCAGGTCCAGCCGCAGAACCCGACCTCAACGGCCAGCCAGTGCGACCGGGGGAACGCGTCCGGGTTCCACTCGGGCGTCCTGTGCGTCGGTCTTGCGGACGGGAGCGTCCGCGGGGTCCGGACGTCGATCGACCCGTCCGTCTGGTGGGGCGCCCTGACCCCGTCCGGCGGGGAGGTCCCGGCCGGCGACTGGTGA
PROTEIN sequence
Length: 333
MPRSTAPHAWRGFTLIELLVVIAIIAILIGLLLPAVQKVREAAARSKCQNNLKQMALALHNANDTNNRLPPMAGTYGGAYYAPLLFHLLPGIEQGNVYNMATISGYIIPMWQTPGPTAGSFLRQTAIPTYKCPSDPTLGVNPATDWLPGDASYAGNFQVFGNRANPTSSAPADWDGRANLTATLTDGTSNTVVFAEKLAVCAGSKGAGNGASDVGGTWWMRGVYNASTFSGSAPGTNDSFPGDRLSAVFGGGKGSDGTLWYTGVAAMFQVQPQNPTSTASQCDRGNASGFHSGVLCVGLADGSVRGVRTSIDPSVWWGALTPSGGEVPAGDW*