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SCN18_30_10_14_R2_B_scaffold_1454_13

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(16552..16923)

Top 3 Functional Annotations

Value Algorithm Source
SgrAlc control protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTH3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 76.0
  • Bit_score: 63
  • Evalue 1.50e-07
XRE family transcriptional regulator {ECO:0000313|EMBL:KJC54167.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 81.0
  • Bit_score: 65
  • Evalue 3.20e-08
helix-turn-helix family protein similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 78.0
  • Bit_score: 61
  • Evalue 1.20e-07

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 372
GTGGCGAAGAAGGGAGTTCCGATCCGGCACGCGGGGGTGGTCGAGCGGTTCGCCGCCCGACTCCGGGAACTGCGGCTGGCCCGCGGGATGACGCAGGCCGAATTGGCACAGCGGGCGAGCGTCACCCCGAACTACGTGGGGAAGCTGGAGAACGCGGGGGCGGCCCCGGGGATCGACCTGGTCGAGCGGCTGGCGATCGCCCTCGGGGTGACGGTGGCCGACCTCCTCCCGACGTCCGCGCCACCCGACCCACACGCCGCTCTCAAGCGGCAGGCCCGCCACCTCTTCGACCGGATCACCGACGACGACCAGGCGCTGACCTTCCTCGTACCGCTCCTCGCCCGCCTACTTGGCGGCCCGGGTAGCCCGTAA
PROTEIN sequence
Length: 124
VAKKGVPIRHAGVVERFAARLRELRLARGMTQAELAQRASVTPNYVGKLENAGAAPGIDLVERLAIALGVTVADLLPTSAPPDPHAALKRQARHLFDRITDDDQALTFLVPLLARLLGGPGSP*