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SCN18_30_10_14_R2_B_scaffold_1634_20

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 19345..20493

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGV8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 379.0
  • Bit_score: 444
  • Evalue 9.70e-122
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 379.0
  • Bit_score: 444
  • Evalue 2.70e-122
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA28090.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 379.0
  • Bit_score: 444
  • Evalue 1.40e-121

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Taxonomy

SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGCGGGCTGTCCTTCTTACGGCCGGTGCCCTCGTGGTCGGCATCGGCCTCGTCGGCTGCACCAAGCCTCCCACAAGCACACCGGCGGCCGCGCCGGTCACGGTCACGGTCAGCCAGCCCGTCGAACGGGACATCACGGACTCCGTGGAGTTCACCGCCCGGACGGCCGCGGTTGATTCCGTCGAGGTGCGGGCGCACGTGTGGGGCTACCTGCAGAAGGTCAACTTCAAGGAAGGTGAGCTGGTCCGGGAGGGGGATGTTCTCTTCGAGATCGACCCGCGCCCGTACGAGGCCCTGCTGAGTCAGGCGAAGGCGAAGGTCCGCCAGAGTGAGGCGCAGCTGAAGCTCGACGAGGCGGAGCACCAGCGGCAGCTCAACGCCTACCGCGCCGGGGCCGGATCGAAGTCGGACCTGGACAAGGCCGTCGCGGCCCAGGACGTCGACCGCGCCAACATCGCGGCCGACCAGGCCCTCGTCGCGGCCCGCCAGCTCGACCTCGACTACACGAAGGTCACCGCGCCGGTCGGCGGGCGCGTCAGCCGGTACGTCGTCACCACGGGCAACCTGGTGCAGGCGGGGGACCAGAACGGCGGCACCCTGCTCACGACCATCGTGTCGGTGAACCCGATGTACGCCTTCTTCGACGTGGACGAGGCCACCGCGCTGCGGGTCCGGCAACTGGCGCGCGAGGGCAAGTCGGCCTCGCCGCGCGACGGGGGCTACCCGGTCTGCCTCGGCCTGGTGAACGAGACCGGGTTCCCCCACCACGGCACGATCAACTTTGTGGAAAACCAGGTCAACCCGAAGACCGGAACGATCCGGGTGCGGGGCGTGTTCCCCAACCCGTACCAGGTGCTCCTGCCCGGTCTGTTCGGCCGCGTGCGGACGCCCATCGGCCGGCCGCACAAGGGTCTCCTCGTCAGCGACCGCGCCATCGACGCCGACCAGGGTCAGAAGATCCTCTACGTCGTCAACGACCAGAACGAGGTCACCTCCCGCCCGGTCCGCGTCGGGGCCCTTCACGACGGGTTGCGTGAGATCACCGACGGTCTGAAGGCGGGCGAGCGGGTGATCGTCACCGGGCTGCAGCAGGTGCGCTCCGGCGCGACGGTTGAGCCGAAACTCGTCCCCATGCCCGGTCTGAAGTGA
PROTEIN sequence
Length: 383
MRAVLLTAGALVVGIGLVGCTKPPTSTPAAAPVTVTVSQPVERDITDSVEFTARTAAVDSVEVRAHVWGYLQKVNFKEGELVREGDVLFEIDPRPYEALLSQAKAKVRQSEAQLKLDEAEHQRQLNAYRAGAGSKSDLDKAVAAQDVDRANIAADQALVAARQLDLDYTKVTAPVGGRVSRYVVTTGNLVQAGDQNGGTLLTTIVSVNPMYAFFDVDEATALRVRQLAREGKSASPRDGGYPVCLGLVNETGFPHHGTINFVENQVNPKTGTIRVRGVFPNPYQVLLPGLFGRVRTPIGRPHKGLLVSDRAIDADQGQKILYVVNDQNEVTSRPVRVGALHDGLREITDGLKAGERVIVTGLQQVRSGATVEPKLVPMPGLK*