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SCN18_30_10_14_R2_B_scaffold_2071_8

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(8243..8833)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DAF similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 203.0
  • Bit_score: 165
  • Evalue 4.50e-38
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 207.0
  • Bit_score: 105
  • Evalue 1.20e-20
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADY59969.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 207.0
  • Bit_score: 105
  • Evalue 5.90e-20

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Taxonomy

SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGACCGACCCCGCCCACGACACCCTCTGGCTCCACGACCGCGTCGCCCGCCTGCGCGACGGCGACCGCGCGGCCGCCGACGAGCTCCTGTGCGCTGCGGCGGCCCGGCTCGAACGGCTCGCCCGCCGGATGCTCGCGGGCTTCCCCGGCGTCCGTACCGGGGCCGACACGGGCGACGTGGTGCAGGGCGCGATGCTCCGCCTCATGAACGCCCTCCGCGCCGTGCGGCCGGCGTCCACCCGCGACTTCGCCGGGCTCGCCGCCCTCCAGGTGCGGCGCGAACTGCTCGACCTGGCCCGCCACTTCGCCGCCCGCGGCGTGAACACCCGCGTCCCCGACCCGGGCACCGCCGACTTCGGCGCCGGCGGCGGCGACAGCGTCGCCGACCTCGACCTGTGGACGCGCTTCCACGCCGCCGCCGGCGAGCTCCCGCCGGACGAGCGCGGGGCGTTCGACCTCCTCTTCTACCAGGGGCACACGCGGGCCGAGGCGGCGCTGCTCCTGGGCGTGTCCGAGCGGACCGTCTACCGGTGGTGGGCGGCCGCCTGCGTCCGCCTCTCCGACCGGCTCGGGGGTTCGCCCCCCGGCTGA
PROTEIN sequence
Length: 197
MTDPAHDTLWLHDRVARLRDGDRAAADELLCAAAARLERLARRMLAGFPGVRTGADTGDVVQGAMLRLMNALRAVRPASTRDFAGLAALQVRRELLDLARHFAARGVNTRVPDPGTADFGAGGGDSVADLDLWTRFHAAAGELPPDERGAFDLLFYQGHTRAEAALLLGVSERTVYRWWAAACVRLSDRLGGSPPG*