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SCN18_30_10_14_R2_B_scaffold_2265_12

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 9170..9880

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45B3 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 99.0
  • Bit_score: 157
  • Evalue 1.10e-35
RNA-binding region RNP-1 {ECO:0000313|EMBL:BAL53816.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 95.0
  • Bit_score: 119
  • Evalue 4.80e-24
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 100.0
  • Bit_score: 115
  • Evalue 1.10e-23

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGCCCGCTCATTCGCCCCCTCATGGACACTTCCGCCCCAAACCCGCGATTCGCTCGGCGGCTGGGCGGCCACGCTGCCGGCGGCGAGGGCCCTCATGGACACTTCCGCCCCAAACCCGCGATTCGCCTTCGCGCCCGCCCGAACCCGGCCTATAGTTCTGCTGAGCGGGTCACGCGGCCCGCCCGTCAGGAGAAGACGTTCTGCCCCGCTACTGTCTCGACCCGACTCTTCTTGGCCACGCCGCTCTGAGCACCATCTCACTGCCGCCCAAGACCGTCCGTCCGCCAGTACCCCAGGTTCACGGCCGCCCGCCCTCCGCGTCGGGCGCCGCGAGCGTCTGCTCCTGCCCCGGCCCGCTGCCACCCCGGCCGCGCGCCGTTCTTTCCCGGGCTCCGGCCCACAAGGTGAGTGCGTTTTGACCAAGAAGCTGTACGTCGGGAACCTGCCCTTCAACGCCACCGCGGACGAACTACGGGAGATGTTCTCCCAGTACGGGCGGGTGGTGAGCGCGACCGTCTGCACCGACCGCGAGACCGGCAACAGCCGCGGGTTCGGGTTCGTCGAAATGGCTGAAGGCACGGACGAGGCGATCCAGGCGCTGAACACGGCGGTGTTCGGCGGCCGGCCGCTGACGGTGAACGAGGCCAAGCCCCGCGAGGGCGGCCGCCCGTCCGGCGGCAGCCGCTCGGGGTACGCCCGCAGCTACTGA
PROTEIN sequence
Length: 237
MARSFAPSWTLPPQTRDSLGGWAATLPAARALMDTSAPNPRFAFAPARTRPIVLLSGSRGPPVRRRRSAPLLSRPDSSWPRRSEHHLTAAQDRPSASTPGSRPPALRVGRRERLLLPRPAATPAARRSFPGSGPQGECVLTKKLYVGNLPFNATADELREMFSQYGRVVSATVCTDRETGNSRGFGFVEMAEGTDEAIQALNTAVFGGRPLTVNEAKPREGGRPSGGSRSGYARSY*