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SCN18_30_10_14_R2_B_scaffold_2764_6

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(3338..4075)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor for flagellar operon n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B56 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 237.0
  • Bit_score: 322
  • Evalue 2.10e-85
RNA polymerase sigma factor for flagellar operon FliA {ECO:0000313|EMBL:BAL53941.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 249.0
  • Bit_score: 232
  • Evalue 5.20e-58
RNA polymerase sigma factor WhiG similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 248.0
  • Bit_score: 153
  • Evalue 4.80e-35

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGACCGGCACCGTGCCCGCCCAGGCATACCAGCGACAGGCCGACCAGCAGCGGCGCGACGGGCTCATCCTGTCGCACTTGCCGCTCGTGAAGCACGTCATCGGCCGGCTCGTCGGCGAGCTGCCGCCGGGGACGGACGTGGACAACTTGGAGGCGGCCGGGGTGCTCGGGCTGGTCGAGGCGGCGGCGAAGTACGACCCGACCCGGAACGCCCAGTTCAAGACGTTCGCGTACCTCCGGGTGCGCGGGGCGGTGGTGGACGAACTCCGCCGTAACAGCCCGCTCCCGCAGCACGTCATGGAGCGCGTCTCGGCCGTCCGCAAGGCGGCGCGCACGCTCGCCCCGCCGGTCACCGTCGAGGCGATCGCCGCGATCACCGGGCTGACCCCCGACGAGGTGGCCGACACGCTGGCGGCCGACCGGTTCAGCAAGATGGTGTCGTGGGAGCAGACGGCCGAGCCGAACGGGTTCGCGCCGGTGCAGTCTTCGGAAGCGCCGGACGCCGGGCTGGAGCGCGAGGAGGAGGCGAAGGAGCTGGCCGACGCGATCGGGGCACTGCCGCGCAAAGAGCGACTGGTGCTGACGCTGTACCACAAGGAGGGGCTGCGGCTGAAGGAAATCGCCGAGGTGCTCCAGCTGTCGGTGTCGCGGGTGTCGCGGCTCCTGACGAAGGCGACGTTCGAGCTGGGCGAGGCGCTGAAGATGAAGCGCAGCCGCGACTTCCTGGCGCGGTGTTGA
PROTEIN sequence
Length: 246
MTGTVPAQAYQRQADQQRRDGLILSHLPLVKHVIGRLVGELPPGTDVDNLEAAGVLGLVEAAAKYDPTRNAQFKTFAYLRVRGAVVDELRRNSPLPQHVMERVSAVRKAARTLAPPVTVEAIAAITGLTPDEVADTLAADRFSKMVSWEQTAEPNGFAPVQSSEAPDAGLEREEEAKELADAIGALPRKERLVLTLYHKEGLRLKEIAEVLQLSVSRVSRLLTKATFELGEALKMKRSRDFLARC*