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SCN18_30_10_14_R2_B_scaffold_2697_3

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(1060..1635)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCU8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 187.0
  • Bit_score: 125
  • Evalue 5.00e-26
DNA-directed RNA polymerase subunit sigma24 similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 187.0
  • Bit_score: 125
  • Evalue 1.40e-26
DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:AGA26695.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 187.0
  • Bit_score: 125
  • Evalue 7.00e-26

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGCGCGACGGATGACCTCACCCAGAACGTTGCTGCCCCCCAACCCGACCCCGACGTAGCCGCCCTGCACGAGGTGAGCGACCGGTTCCTCCGCCGGGCTGCCAGAAGGCGGCTGACCCCGGAACTCAGGCGGGCACTCGACTCGGTCGACGTGGCCCAGGAGGTGTGGGCGGGGCTCATCCGCGCCGGGGTGACGGCCGGCCAGTTCGGCTCCCCGGGGCAGTTCCGGGCGTACCTCGTTCGGGCGGTGCGGAGCCGGGTGGTGGACTGGGTCCGTCGCCACCCCCCGGCGCCGGCGACCGGGTTCGTGGGCGCGAGCCGACCGGTCGAGGAGATTCCCGCCGGCGACCCGCGGCCGAGCGAGGAGGCGAAGGCGACCGACCTGTGGGAGCAACTGCTGGCCGTCTGCCCGCCCGAGCACCGCCCCGTCCTGACGCTCCGTCGACAGGGCCTGACGCTGCACGAGGTGGCCACCCGGACCGGGCTGCACGAGGGGAGCGTCCGGCGCATCCTCCGCGACCTCGCCCGGAAGGTCGCCTTCCACAGCCCCGACTCCGGTGGGGGGCGCCCGTGA
PROTEIN sequence
Length: 192
MSATDDLTQNVAAPQPDPDVAALHEVSDRFLRRAARRRLTPELRRALDSVDVAQEVWAGLIRAGVTAGQFGSPGQFRAYLVRAVRSRVVDWVRRHPPAPATGFVGASRPVEEIPAGDPRPSEEAKATDLWEQLLAVCPPEHRPVLTLRRQGLTLHEVATRTGLHEGSVRRILRDLARKVAFHSPDSGGGRP*