ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2967_7

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(5601..6131)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C40E0 similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 146.0
  • Bit_score: 204
  • Evalue 6.00e-50
Putative 23S rRNA pseudouridine synthase {ECO:0000313|EMBL:EAQ77322.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 145.0
  • Bit_score: 152
  • Evalue 4.90e-34
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 144.0
  • Bit_score: 137
  • Evalue 2.50e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 531
ATGGTCATCGACACGAACGGGACGGACGCGCCCCCGGCGGACCGGCCGAATGACGGTAGGCGAATGACGAAGGAGGTCATCCTTCACGAGGACATCTACCTCCTCGCCGTCAACAAGCCGGCCCCGCTGCTGACGCAGGCGCCGCCGGCGGTGCCGAGTCTTGAGGCGATGGTGAAGGCGTACCTCAAGGCCAAGCACAGCAAGGCGGGGAACGTCTACCTCGGCATCCCGCACCGGCTCGACCGGCCGGTGTCCGGCGTCGTCGTGTTCGCCCGCAACACGAAGGCCGCCCGCCGCATCCACGCCCAATTCCAGGAACACACCGTCCGCAAGGTCTACTGGGCCGTCGTCGCCGGCGAGGTGACGCCGGACGCCGGCGTGTGGGAGGATTGGGTTCGCAAGATCCAGGACGAGGCGCGGACGGTGAAGGCGGCGGAGGGCGAACCCGGCGCGAAGCTGGCGATGCTCGAATACCGCGTGATCCGCCGGCTGGAGGGCCGCACGCTGGTCGAACTNNNNNNNNNNNNNTGA
PROTEIN sequence
Length: 177
MVIDTNGTDAPPADRPNDGRRMTKEVILHEDIYLLAVNKPAPLLTQAPPAVPSLEAMVKAYLKAKHSKAGNVYLGIPHRLDRPVSGVVVFARNTKAARRIHAQFQEHTVRKVYWAVVAGEVTPDAGVWEDWVRKIQDEARTVKAAEGEPGAKLAMLEYRVIRRLEGRTLVEXXXXX*