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SCN18_30_10_14_R2_B_scaffold_3342_11

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 7193..7780

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3863 similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 212.0
  • Bit_score: 279
  • Evalue 2.10e-72
RNA polymerase sigma factor {ECO:0000313|EMBL:EZQ19187.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 164.0
  • Bit_score: 114
  • Evalue 9.70e-23
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 182.0
  • Bit_score: 113
  • Evalue 4.30e-23

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Taxonomy

Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGTCGCTCGAACCCGACCCCCCCGCCGACGCGGAGGAGGAAGACTGGCTCCGGGCCGCCCTGGCCGGCGACCGGTCGGCCGCCGCCCGACTCGTGGAGCGGTACTGGGACCGGCTGTACCGGTGGCTCGTCCACCTGACGCGCGACCGCCACGCGGCCGAAGACCTGACGCAGGAGACGTTCCTCAAAGCACTCGCGGCCCTGCCGTCGTTCCGCCCGGGGAGTAACTTCCGGGCCTGGTTGTTCCGCATCGGGCACAACAACTTCGTGAACCTCAAGCGGGCGACCCGCCGCACCCGCCACCCGCTCCCGGACGACCTCGCCGCCGCCGGGGCCGGCGCCGCCGAGCTGGCGGCCGAGGACCGCGAGGCGCTGGCGGTGGTCGGGCAAGCGGTGTCGGCGCTGCCGCCGGACTTCCGCGCCGCGCTGCTGCTGCGGGTCGAGGAAGGACTGTCGTTCCGCGACGTGGCGAAGGTGCTGGGGACGACGGAGGAGACGGCCCGGTGGCGGGTGTTCAAGGCCCGCCAAAAACTGATGAAGGTGGTCGCCCCTGAACTGCTCCCGCCGGGCGCAACGACGGGGGAGTAA
PROTEIN sequence
Length: 196
VSLEPDPPADAEEEDWLRAALAGDRSAAARLVERYWDRLYRWLVHLTRDRHAAEDLTQETFLKALAALPSFRPGSNFRAWLFRIGHNNFVNLKRATRRTRHPLPDDLAAAGAGAAELAAEDREALAVVGQAVSALPPDFRAALLLRVEEGLSFRDVAKVLGTTEETARWRVFKARQKLMKVVAPELLPPGATTGE*