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SCN18_30_10_14_R2_B_scaffold_3418_3

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(3108..3446)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C95 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 129.0
  • Bit_score: 173
  • Evalue 9.40e-41
RRM domain-containing RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 125.0
  • Bit_score: 166
  • Evalue 3.20e-39
RRM domain-containing RNA-binding protein {ECO:0000313|EMBL:AGA27437.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 125.0
  • Bit_score: 166
  • Evalue 1.60e-38

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGAGCAAGAAACTGTACGTCGGGAACATCTCCTTCCAAACCACGAACGAGGAACTGGCCCAGGTGTTCGGCCAGTTCGGGACTGTCACCAGCGCCCAGGTCATCACCGACCGTGAGACCGGCCGCAGCCGCGGGTTCGCCTTCGTCGAGATGGCGGACGGCGGCGACGAGGCGGTCAACGCCATGAACGGTGCCCTGCTGGGCGGCCGCACCCTGACCGTCAACGAGGCCAAGCCGCGGGAAGACCGTGGCGGCGGCGGTGGCGGTGGTGGTCGGGGCGGCTACGGCGGTGGCGGCGGCCGCGGTGGCTACGGCGGCGGCGGCCGTGGCGGGTACTGA
PROTEIN sequence
Length: 113
MSKKLYVGNISFQTTNEELAQVFGQFGTVTSAQVITDRETGRSRGFAFVEMADGGDEAVNAMNGALLGGRTLTVNEAKPREDRGGGGGGGGRGGYGGGGGRGGYGGGGRGGY*