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SCN18_30_10_14_R2_B_scaffold_3728_16

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(8314..9963)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein, Csd1 family n=1 Tax=Desulfovibrio sp. X2 RepID=S7U294_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 562.0
  • Bit_score: 239
  • Evalue 5.20e-60
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:EPR43457.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.6
  • Coverage: 562.0
  • Bit_score: 239
  • Evalue 7.30e-60
CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG similarity KEGG
DB: KEGG
  • Identity: 29.9
  • Coverage: 492.0
  • Bit_score: 208
  • Evalue 2.80e-51

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1650
GTGCCGTTCGTGATCCAGGTCGGCGAGGGCGGTGCGTTTCTCGGCATCGACGGCGAGCGGCCGCGCCCGCCGAAGAAGGGAGAGGCGCGCGTCGAGCGGAAGCTGTCGATCCCGCAGCCGCACGGGAACACGGCGAGCCAAGGGTTCGCCCGGTACTTCGCGGACACCGTGGCCCGGGTACTGCCGGTCGTGTTCGACCCGAAGAACGCGGAGAAGGAGGCTCGCAGCCGCAAGACGTTCTGGGGGCAGATCGATCGGGCGACGGACGCGACCGACGACCCCGCCCTGCGGGCGGTGCAGGCGTTCGGCCGGCGGCTGGCGGAGGAGTCGTTCGCCGGGGAAGTGCGGACGGCGGCGGGGGCGAAGGAGGCGACCGGGGCCGAGCGGGTGACGTTCGCGTTTCACCCGGACGGTGGGCCAACGATCCTCGACCGGCTCACCGTCAAGCAGTGGTACACGGGGTTTTTCCGCACCTTCACCGACGCGAAGCAGACGGACGGCCCGGTGGGGTTTTGCACGATCACCGGCCGCACCGGCCCGCTGCCGACGACCCACGCGATGGCCCTGACCGGGGTGCCGGGCGGACTGCCGACGAGGGTGAAGATCGTTAGCTTCGACAAGCCGGCGTTCCGGCACTACGGGTTGGACGGGGCGGCGAACGCGGCCGTCGGGTACGCCGCGGCCGTCGGGTACGCCGCCGACGACGGGTACGCCCGCGGGTTCCAGTGGCTGCGGAACCAGCGCGACCACAACTTCGTCGTCGGCGGGACGCTGTTCCTGTTCTGGACGCGGATCGAGGCGGACTTGGGGGACGTCAACCAACTCGGGCAGCCGGACGCGGACCAGGTGAAGAAGTTGCTCGCCGGCGTGGCCGGCGGGAAGGACGCGCACGCGGCCGAGGGCGCGAACGACTTCTACCTGCTGGCGGTGTCGGGCAACTCGGCCCGGGCGGTCGTCCGCGACTACCTGGAGCGCCCGCTCGGCGAGGTGCGGGCGAACATCCGTCGGTGGTTCGCCGACCTGCGCATCGCGGACACGTCGAAGGAATACCAGGGTCGGGCGAACGCGGCGTTCCCGCTGTGGGTGCTGGCGACCGCCACTGCCCTGGAGGCCGACCGCGTCGCCCCGGACACGCACACCCGGCTGGTGCACGCCGCCCTCACCGGCGGGCCGGTCCCGGACTCGATCCTCGCCGCGTGTGTGACGCGGCTCCGGGCGGAGGGGCAGGACGGCTTCCGCCCCGCCCGGATGGCGCTCGTCAAGCTCTGCCTCAACCGACAGGGGGTTCCCGTGGCCGAGACGTTGCAGCCCGACGCGGTCCACCCGGCCTACGCCTGCGGCCGGCTGACCGAGGTGTTCGCCCAGATCCAGTACGCCGCGCTCGGCGACGTGAACGCCACCGTGGTGGACAAGTTCTACGGCACGTTCAGCGCCACCCCGGCGATGGTGTTCGGCCGGCTCGTCGCCAACGCCCAGAATCACCTCCGCAAGCTCCGTGGCGAAGACGACGCGGCGTATGTGGCCCTCGAACGGCGTCTGGCCGAAATCCTCAGCCAGCTTCCACCCGCCCTGCCCCCCAGCTCAATTCTCCCTCCGCGAGCAGGGGCTTTTTGCCCTTGGGTATTACCACGAGAAGGCGAAACGGTTTGA
PROTEIN sequence
Length: 550
VPFVIQVGEGGAFLGIDGERPRPPKKGEARVERKLSIPQPHGNTASQGFARYFADTVARVLPVVFDPKNAEKEARSRKTFWGQIDRATDATDDPALRAVQAFGRRLAEESFAGEVRTAAGAKEATGAERVTFAFHPDGGPTILDRLTVKQWYTGFFRTFTDAKQTDGPVGFCTITGRTGPLPTTHAMALTGVPGGLPTRVKIVSFDKPAFRHYGLDGAANAAVGYAAAVGYAADDGYARGFQWLRNQRDHNFVVGGTLFLFWTRIEADLGDVNQLGQPDADQVKKLLAGVAGGKDAHAAEGANDFYLLAVSGNSARAVVRDYLERPLGEVRANIRRWFADLRIADTSKEYQGRANAAFPLWVLATATALEADRVAPDTHTRLVHAALTGGPVPDSILAACVTRLRAEGQDGFRPARMALVKLCLNRQGVPVAETLQPDAVHPAYACGRLTEVFAQIQYAALGDVNATVVDKFYGTFSATPAMVFGRLVANAQNHLRKLRGEDDAAYVALERRLAEILSQLPPALPPSSILPPRAGAFCPWVLPREGETV*