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SCN18_30_10_14_R2_B_scaffold_5420_1

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(2..412)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4010 similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 131.0
  • Bit_score: 131
  • Evalue 6.50e-28
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 130.0
  • Bit_score: 115
  • Evalue 6.20e-24
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA31521.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 130.0
  • Bit_score: 115
  • Evalue 3.00e-23

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGCCGACCAACCCTCTCAGCCGGGCCGTGGGTAAAGTCCGGTGCGCACTCGCCGGCGCGGCCGACCTTCCCGCCACGGACGGACAGCTCGTGGCCCGGTTCGTGGCGGACCGGGGCGAGGCGGCGTTTGTCGCCCTCGTCCGCCGGCACGGGCCGATGGTCCTCGGCGTCTGTCGGCGGGTGACAGGCGATTACCACGCGGCCGAGGACGCCCTGCAGGCGACCTTCCTCGTGCTCGCCCGGCGGGCCGCGGACATCGCCCCGCCCGACCGGGTCGGCCCGTGGCTCTACGGGGTCGCCTGGCGGGTGGCCCGCGCCGCGCAGAAGGCCGAGCGGCGGCGGTCCGGGCGCGAGCGCCCGACGGGCACACTCCCGGAAGTCGCGGGACCCGAGCCCGGCGACCTCTGGGAT
PROTEIN sequence
Length: 137
MPTNPLSRAVGKVRCALAGAADLPATDGQLVARFVADRGEAAFVALVRRHGPMVLGVCRRVTGDYHAAEDALQATFLVLARRAADIAPPDRVGPWLYGVAWRVARAAQKAERRRSGRERPTGTLPEVAGPEPGDLWD