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SCN18_30_10_14_R2_B_scaffold_53835_1

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 2..1048

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 333.0
  • Bit_score: 276
  • Evalue 3.40e-71
ribosomal large subunit pseudouridine synthase D n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C585E similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 313.0
  • Bit_score: 524
  • Evalue 5.20e-146
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 333.0
  • Bit_score: 276
  • Evalue 6.90e-72

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Taxonomy

CN-SCN_Erythrobacter_14x → CN-SCN_Erythrobacter_14x → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
CCAAGAATCGCCCGGGGTGGCCGCCCCGGGCTCGCCCCCAGCCTGACAATCCACCTGCTCCTCGACTTCGCCCGCCGCCGAACCATGCCCGCCGAACCCACCGCCTTCACCGTTCTCGCCGCCGAGGCCGGGCACACGCTCGCCAAGGTGCTCCGCAGCCGCCTCGGCGGGCCGTCGTGGGGCGAGGTGCGCAAGCTCATCGCCGCCCGCCGCGTCAAGGTCGGCGACGCCGTGTCCACCGACGAGGCGCGGCGCCTCAAGGAGGACGAGGTCGTCGTGCTCCTTGAGCACCCGAAGCCGCTGCCGCGGGCCGCGCACCCCGAGCGCCTCGTGGTCCGCCACCTCGACGAGCACGTCGTCGTCGTCGAGAAGCCGGCGGGGGTGAACACGGTGCGCCACCCGGCCGAGCTGGAGTGGTCCGAGGAGCGGCGCGAGCTCGACCCGACGCTCGAAGACCTGGCGCAGTGGGCGGTCGCCCACCGCCTCAAGCGCCCGGCGTCCGACCTGACGCGGCTGCGGATCGTCCACCGGCTCGACAAGGAGACGAGCGGGCTGCTCGTGTTCGCCCGGTCGGTGCTCGCCGAGCGCGAGCTCGGGATGCAGTTCCGCAAGCACACCGTCACCCGCCGCTACCTGACGGTCGTGCCCGGCATCTTCCTCGACCGCACGATCGCGTCGAACCTCGTCCCTGACCGCGGCGACGGCCGGCGCGGCAGCACCACGTTCCCGGACGTGGGGAAGCACGCCGTCACGCACGTGGCGGTGCAGGAACGGCTGCGCGGGTACACGCTCCTGTCGTGCCGGCTGGAGACGGGGCGGACGCACCAGATCCGCATTCACCTGTCGGAGGCGGGTCACCCGGTGTGCGGGGACAAGGTGTACTGCAAGAAGCCGAACGGCGAGGTGGTGCCGGACGCGAGCGGCGCCCCGCGGCTGGCGCTGCACGCGACCGAACTGGGCTTCACGCACCCGGCGACCGGCGCGGCGCTCCACTGGGAGATGCCGCTGCCGGCCGACCTGACGAAGTTCGTCGCCGGGCTGCGGTAG
PROTEIN sequence
Length: 349
PRIARGGRPGLAPSLTIHLLLDFARRRTMPAEPTAFTVLAAEAGHTLAKVLRSRLGGPSWGEVRKLIAARRVKVGDAVSTDEARRLKEDEVVVLLEHPKPLPRAAHPERLVVRHLDEHVVVVEKPAGVNTVRHPAELEWSEERRELDPTLEDLAQWAVAHRLKRPASDLTRLRIVHRLDKETSGLLVFARSVLAERELGMQFRKHTVTRRYLTVVPGIFLDRTIASNLVPDRGDGRRGSTTFPDVGKHAVTHVAVQERLRGYTLLSCRLETGRTHQIRIHLSEAGHPVCGDKVYCKKPNGEVVPDASGAPRLALHATELGFTHPATGAALHWEMPLPADLTKFVAGLR*