ggKbase home page

SCN18_30_10_14_R2_B_scaffold_181_4

Organism: CN18_30_10_14_R2_B_Alphaproteobacteria_67_12

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: 2749..5082

Top 3 Functional Annotations

Value Algorithm Source
Probable tonB-dependent receptor yncD n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUI5_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 776.0
  • Bit_score: 953
  • Evalue 1.00e-274
TonB-dependent receptor {ECO:0000313|EMBL:GAN77551.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 796.0
  • Bit_score: 975
  • Evalue 3.50e-281
Putative tonB-dependent receptor yncD precursor similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 776.0
  • Bit_score: 953
  • Evalue 2.80e-275

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2334
GTGCCGAACCGCATCCTTCTTGCAGCAGCCATATTGGGCCTGCCCGCGGCCGCGCTTGCCCAGGACGTTGCCCCCCTGCCCTCGGCTGCCCCGCCGCCAGTTACGGAGTTGCCGCCAGTCAGCGTCATCGGCAGCACCCCGCTCCTCGGTTCCGGCGTGGATCGCGACAAAGTGCCGGCCCAGACCAATGTCCTCACGGACCGGGACATCACGCGAGACGGCAACGCGAACGTGCTGCGCGCTCTCAACCAGAACGTTCCCGGCGTGACGCTCGACGCGGCCGCCGGCAATCCATACCAACCCACGCTGTTCTATCACGGCTTCCAGGCCTCGCCGCTGCAAGGCAACGCGCAAGGGCTCGCCGTCTACCTCAACGGTGTGCGGTTCAATCAGGCATTCGGCGACACGGTGAACTGGGACCTGCTGCCCGACATCGCGATCGACCGGCTCAATCTCGTCGGGTCCAATCCGGTGTTCGGCCTCAACGCGCTGGGCGGCGCGCTGTCGGTGCAGCTCAAAAACGGCTTCACCTATCAGGGCGCCGAGCTGACCGCGCTGGGCGGCTCGTTCGGCAAGGTGCAGGGCGAGTTCCAGTTCGGCAAGCAGATCGGCGATGTCGCCACCTACATCGCTGGCAGCGCGCTGCACGAGGGCGGCTGGCGCGATATGCAATCCTCCGACATCTACAATATTTACGGCGATGTCGGCTGGCGCGGCGAGAAGGCCGAGCTGCATCTGAACATCGTGGGCGCCGATACGAACCTCAACGGACCGGGCACCTCGCCCGTGCAGTTGCTGGCGGCGGACCCGCGCGCGCAGTTCACCGCGCCCAATCTGATCGCCAACAAATACAGCCTGATCAGCCTCAACGGCTCGTACGACATCAACGACAAGACGTCCGTGCAGGCGCTGGCGTACTACGATTATTTCCAGCAGCGCGTCGTCAACGGCAACGTCACCGACGTAGCGGTGTGCGACGACGATCCGGGATTCCTCTGCGTGTCGGATGACGTGTTCGCCACCGACCGTGCCAGCAATCCCATTCCGAATTTTCTCAATGGCGGCCCCTACTCCGCCCTCGACCAGCAGACGACCAATACCAACGGCTACGGCGCCTCGACACAGATCACCTATCGCGGCGCGGTTTTCGGCCTGCCCAATCAGCTGGTCGCCGGATTGAGCTTCGACGGCGCCAGCACGATGTTCAGTGCGAACTCCACGGTCGGCGGCCTCTCGCCGCTGGATCGGTTGTTCGTTGGACCCGGCGTCGTCATCGACCAGGCGGACGGCTCCATCGCGCCGGTGCGCGTGGGAATCAGCAATGCGTATTACGGCGCGTTCTTCACCGACACGCTGGACATCACCTCCAAGCTCTCGGCGACGGTCGCCGGCCGCTTCAACGCGGCCGAGATCGACATGACCGACCAGAACGGCACCGCGCTGACCGGCAATCACTCCTACAGCCGCTTCAATCCCTCGGGAGGCCTCAGCTACAAGGTGCTGCCGGGTTTGAGCGTCTATGCCAGCTACGCCGAGGCGAACCGCGCACCGACGCCGGCGGAGCTCTCCTGCGCCAGTGCCGCGAGCCCGTGCAGCCTGGCGAATTTCTTCGTCGGCGACCCGGACCTCAAGCAGGTCGTCGCCCATACGATCGAGGCCGGTGTGCGCGGCCATTTCCGCCCGTGGACCGACGCGAACCTGTCGTGGAACGTCGCGTATTTCCACACCGACCTCGACGACGACATCCTGTTCGTCAACAGCCCCGTCGCGGGGCGTGGGTTCTTTCAGAATGTCGGTTCGACGCGGCGCCAGGGGGTCGATGTCGCCGCCCGGCTGACCACCGAGCGTCTGCTCGCCTACGCCAGCTACTCGTATATCGATGCGACGTTCCAGAGCGGATTTCTTGCATCGAGCGAGGACAATCCCGGCGCGGACGCCAGCGGCAACATCCAGGTGCGGCCGGGCGACCGACTGCCGGGCGTCCCGCAGCACCTGGTGAAGCTCGGGGTGAGCTACAAAGTGACGGACCAGTGGACGGTCGGCGCGACCGGGGTGGGGGCGACCGGGCAATATCTCTTCGGGGACGAGGCCAATCTGCAACCCAAGACGCCGGGCTATTTCATCGTCAATCTGAACACGAGCTATCAGCTGACACCGAACATCCAGCTATTCGGGCTGGTCGAGAACGTGCTCAACTCGAAATACTACACTTTCGGCACGTTCTCCCCGACCTCCTCGGTGTTTCTTGCCCAGGCGCCAGGTGCCACCAACCCGCGAAGCTACAGTCCGGCCGCGCCGGTGGCCGGCTATGGCGGGTTGCGTGTGACGTTCTGA
PROTEIN sequence
Length: 778
VPNRILLAAAILGLPAAALAQDVAPLPSAAPPPVTELPPVSVIGSTPLLGSGVDRDKVPAQTNVLTDRDITRDGNANVLRALNQNVPGVTLDAAAGNPYQPTLFYHGFQASPLQGNAQGLAVYLNGVRFNQAFGDTVNWDLLPDIAIDRLNLVGSNPVFGLNALGGALSVQLKNGFTYQGAELTALGGSFGKVQGEFQFGKQIGDVATYIAGSALHEGGWRDMQSSDIYNIYGDVGWRGEKAELHLNIVGADTNLNGPGTSPVQLLAADPRAQFTAPNLIANKYSLISLNGSYDINDKTSVQALAYYDYFQQRVVNGNVTDVAVCDDDPGFLCVSDDVFATDRASNPIPNFLNGGPYSALDQQTTNTNGYGASTQITYRGAVFGLPNQLVAGLSFDGASTMFSANSTVGGLSPLDRLFVGPGVVIDQADGSIAPVRVGISNAYYGAFFTDTLDITSKLSATVAGRFNAAEIDMTDQNGTALTGNHSYSRFNPSGGLSYKVLPGLSVYASYAEANRAPTPAELSCASAASPCSLANFFVGDPDLKQVVAHTIEAGVRGHFRPWTDANLSWNVAYFHTDLDDDILFVNSPVAGRGFFQNVGSTRRQGVDVAARLTTERLLAYASYSYIDATFQSGFLASSEDNPGADASGNIQVRPGDRLPGVPQHLVKLGVSYKVTDQWTVGATGVGATGQYLFGDEANLQPKTPGYFIVNLNTSYQLTPNIQLFGLVENVLNSKYYTFGTFSPTSSVFLAQAPGATNPRSYSPAAPVAGYGGLRVTF*