ggKbase home page

SCN18_30_10_14_R2_B_scaffold_249_25

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(24494..25372)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E826D4 similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 287.0
  • Bit_score: 369
  • Evalue 1.80e-99
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC50577.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 275.0
  • Bit_score: 359
  • Evalue 4.40e-96
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 275.0
  • Bit_score: 357
  • Evalue 2.00e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCTGGCCGCCGCCCGCATCCTGGGCCTCAACCACGCCACCGTGGGGCGCCAGCTCACCGCCCTGGAAGAAGAGCTGCAGACCAAACTTCTGGAGCGCCATGTCAACGGATGCACCCTGACATCGGCGGGCGAAGCATTGATGGCATCCGCCGAAAAAGTCGAATCCGAATTCCTCCAGCTTGAATCGGCGCTGTCCGGTACCATCGGCGCGATCCGCGGCACAGTGCGGGTGGGCGCACCGGACGGCTTGGGCAATTATTTCCTGGCCTCGAAACTGGCGGAGCTTTCCGCCCGGCATTCCGACCTTTTGGTCCAGCTGGTTCCACTGCCCCGCACATTTTCGCTGTCGCGGCGCGAAGCGGACATCGTGATCACCCTGGACCGCCCGGTGCAGGGCAATCTGATCATCCAGAAACTGACGGACTACACGCTCAGCCTTTATGCGTCTGAGGAATATCTACGGGACAAGCCCCCGATCCGCAGCGAGGAAGACCTGAAGCAGCATCTGTTCGTGACCTATGTCGACGATCTGATCCACACGCCATCCCTGGATTACGGGCGCGAGCTTGCCGCGAGCATGCCCCGCCGTTTCGAATGCGGCAGCGTGGTGGGCCAGATGGAGGCCGTCCGCACCGGCAACGGCATCGCCATTCTGCACGATTATGCGGCCAAATATGTGCCCAACTTCCGCCGCGTCCTGCCGCATCTCCAGTTCGTCCGCAACTATTGGCTGATATCCCATCCCGATACCCACCGTTCGCACCGGGTCACGGAAGTCAGGCGCCACATCGCCGAAGCGGTGAATGCGTCCAAGGAACGCTTCTGTCCCTGGGGCAATGATGCGGTTCAGGCACCGGAGCTAGTCGATCAGGCCTGA
PROTEIN sequence
Length: 293
MLAAARILGLNHATVGRQLTALEEELQTKLLERHVNGCTLTSAGEALMASAEKVESEFLQLESALSGTIGAIRGTVRVGAPDGLGNYFLASKLAELSARHSDLLVQLVPLPRTFSLSRREADIVITLDRPVQGNLIIQKLTDYTLSLYASEEYLRDKPPIRSEEDLKQHLFVTYVDDLIHTPSLDYGRELAASMPRRFECGSVVGQMEAVRTGNGIAILHDYAAKYVPNFRRVLPHLQFVRNYWLISHPDTHRSHRVTEVRRHIAEAVNASKERFCPWGNDAVQAPELVDQA*